Gene : Glyma.11G218000 G. max Wm82.a2.v1
Defline:  (1 of 4) 3.4.21.108 - HtrA2 peptidase / Serine proteinase OMI Genomic Order:  2180
Name:  ? Glyma.11G218000 Secondary Identifier:  ? PAC:30530489
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G218000 0.5kb upstream 0.5kb upstream 24113 true Chr11: 31257816-31281928 Glycine max
Glyma.11G218000 0.5kb upstream 0.5kb upstream 500 false Chr11: 31257816-31258315 Glycine max
Glyma.11G218000 0.5kb downstream 0.5kb downstream 24113 true Chr11: 31258316-31282428 Glycine max
Glyma.11G218000 0.5kb downstream 0.5kb downstream 500 false Chr11: 31281929-31282428 Glycine max
Glyma.11G218000 1.0kb upstream 1.0kb upstream 24613 true Chr11: 31257316-31281928 Glycine max
Glyma.11G218000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31257316-31258315 Glycine max
Glyma.11G218000 1.0kb downstream 1.0kb downstream 24613 true Chr11: 31258316-31282928 Glycine max
Glyma.11G218000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31281929-31282928 Glycine max
Glyma.11G218000 2.0kb upstream 2.0kb upstream 25613 true Chr11: 31256316-31281928 Glycine max
Glyma.11G218000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31256316-31258315 Glycine max
Glyma.11G218000 2.0kb downstream 2.0kb downstream 25613 true Chr11: 31258316-31283928 Glycine max
Glyma.11G218000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31281929-31283928 Glycine max
Glyma.11G218000 5.0kb upstream 5.0kb upstream 28613 true Chr11: 31253316-31281928 Glycine max
Glyma.11G218000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31253316-31258315 Glycine max
Glyma.11G218000 5.0kb downstream 5.0kb downstream 28613 true Chr11: 31258316-31286928 Glycine max
Glyma.11G218000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31281929-31286928 Glycine max
Glyma.11G218000 10.0kb upstream 10.0kb upstream 33613 true Chr11: 31248316-31281928 Glycine max
Glyma.11G218000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31248316-31258315 Glycine max
Glyma.11G218000 10.0kb downstream 10.0kb downstream 33613 true Chr11: 31258316-31291928 Glycine max
Glyma.11G218000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31281929-31291928 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304692 5265 Fabidae View MSA
124066487 5270 Rosid View MSA
123749112 5271 Pentapetalae View MSA
122789271 5272 Eudicot View MSA
122042652 5273 Angiosperm View MSA
121347619 5274 Embryophyte View MSA
123428262 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.2374 0.0 97.5686 High High
cufflinks 13.7981 0.0 49.1904    
cufflinks 16.2033 0.0 59.4377    
cufflinks 22.3043 0.0 87.7432 High  
cufflinks 21.6719 0.0 84.5901 High  
cufflinks 9.88158 0.0 33.95   Low
cufflinks 12.2977 0.0 43.0674   Low
cufflinks 23.2581 0.0 92.5318 High  
cufflinks 17.6654 0.0 65.8985    
cufflinks 2.033        
cufflinks 0.708       Low
cufflinks 1.825        
cufflinks 1.825        
cufflinks 2.258        
cufflinks 1.629        
cufflinks 2.061        
cufflinks 2.349       High
cufflinks 2.181        
cufflinks 1.953        
cufflinks 1.481        
cufflinks 1.307        
cufflinks 1.769        
cufflinks 1.759        
cufflinks 0.813       Low
cufflinks 1.694        
cufflinks 1.974        

0 Strain