Gene : Glyma.11G219300 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR21596:SF25 - TRANSCRIPTION REGULATOR-LIKE-RELATED Genomic Order:  2193
Name:  ? Glyma.11G219300 Secondary Identifier:  ? PAC:30531004
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G219300 0.5kb upstream 0.5kb upstream 3951 true Chr11: 31388670-31392620 Glycine max
Glyma.11G219300 0.5kb upstream 0.5kb upstream 500 false Chr11: 31388670-31389169 Glycine max
Glyma.11G219300 0.5kb downstream 0.5kb downstream 3951 true Chr11: 31389170-31393120 Glycine max
Glyma.11G219300 0.5kb downstream 0.5kb downstream 500 false Chr11: 31392621-31393120 Glycine max
Glyma.11G219300 1.0kb upstream 1.0kb upstream 4451 true Chr11: 31388170-31392620 Glycine max
Glyma.11G219300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31388170-31389169 Glycine max
Glyma.11G219300 1.0kb downstream 1.0kb downstream 4451 true Chr11: 31389170-31393620 Glycine max
Glyma.11G219300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31392621-31393620 Glycine max
Glyma.11G219300 2.0kb upstream 2.0kb upstream 5451 true Chr11: 31387170-31392620 Glycine max
Glyma.11G219300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31387170-31389169 Glycine max
Glyma.11G219300 2.0kb downstream 2.0kb downstream 5451 true Chr11: 31389170-31394620 Glycine max
Glyma.11G219300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31392621-31394620 Glycine max
Glyma.11G219300 5.0kb upstream 5.0kb upstream 8451 true Chr11: 31384170-31392620 Glycine max
Glyma.11G219300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31384170-31389169 Glycine max
Glyma.11G219300 5.0kb downstream 5.0kb downstream 8451 true Chr11: 31389170-31397620 Glycine max
Glyma.11G219300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31392621-31397620 Glycine max
Glyma.11G219300 10.0kb upstream 10.0kb upstream 13451 true Chr11: 31379170-31392620 Glycine max
Glyma.11G219300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31379170-31389169 Glycine max
Glyma.11G219300 10.0kb downstream 10.0kb downstream 13451 true Chr11: 31389170-31402620 Glycine max
Glyma.11G219300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31392621-31402620 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122246667 5265 Fabidae Singleton cluster - no MSA
124041637 5270 Rosid View MSA
123753047 5271 Pentapetalae View MSA
122797032 5272 Eudicot View MSA
122049313 5273 Angiosperm View MSA
121351594 5274 Embryophyte View MSA
123382240 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0188908 0.0 0.0854342 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0217548 0.0 0.0962935 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain