Gene : Glyma.11G220400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN Genomic Order:  2204
Name:  ? Glyma.11G220400 Secondary Identifier:  ? PAC:30528141
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G220400 0.5kb upstream 0.5kb upstream 2732 true Chr11: 31570852-31573583 Glycine max
Glyma.11G220400 0.5kb upstream 0.5kb upstream 500 false Chr11: 31573084-31573583 Glycine max
Glyma.11G220400 0.5kb downstream 0.5kb downstream 2732 true Chr11: 31570352-31573083 Glycine max
Glyma.11G220400 0.5kb downstream 0.5kb downstream 500 false Chr11: 31570352-31570851 Glycine max
Glyma.11G220400 1.0kb upstream 1.0kb upstream 3232 true Chr11: 31570852-31574083 Glycine max
Glyma.11G220400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31573084-31574083 Glycine max
Glyma.11G220400 1.0kb downstream 1.0kb downstream 3232 true Chr11: 31569852-31573083 Glycine max
Glyma.11G220400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31569852-31570851 Glycine max
Glyma.11G220400 2.0kb upstream 2.0kb upstream 4232 true Chr11: 31570852-31575083 Glycine max
Glyma.11G220400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31573084-31575083 Glycine max
Glyma.11G220400 2.0kb downstream 2.0kb downstream 4232 true Chr11: 31568852-31573083 Glycine max
Glyma.11G220400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31568852-31570851 Glycine max
Glyma.11G220400 5.0kb upstream 5.0kb upstream 7232 true Chr11: 31570852-31578083 Glycine max
Glyma.11G220400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31573084-31578083 Glycine max
Glyma.11G220400 5.0kb downstream 5.0kb downstream 7232 true Chr11: 31565852-31573083 Glycine max
Glyma.11G220400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31565852-31570851 Glycine max
Glyma.11G220400 10.0kb upstream 10.0kb upstream 12232 true Chr11: 31570852-31583083 Glycine max
Glyma.11G220400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31573084-31583083 Glycine max
Glyma.11G220400 10.0kb downstream 10.0kb downstream 12232 true Chr11: 31560852-31573083 Glycine max
Glyma.11G220400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31560852-31570851 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304195 5265 Fabidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.50473 0.0 20.4937    
cufflinks 5.08829 0.0 14.4142   Low
cufflinks 8.34598 0.0 22.6799    
cufflinks 8.38557 0.0 22.7633    
cufflinks 10.8397 0.0 29.0443   High
cufflinks 10.8279 0.0 29.0247   High
cufflinks 6.09962 0.0 16.9159   Low
cufflinks 10.6019 0.0 28.4631   High
cufflinks 6.6945 0.0 18.4433    
cufflinks 19.464     High High
cufflinks 17.762     High High
cufflinks 10.901     High  
cufflinks 10.997     High  
cufflinks 8.213     High  
cufflinks 14.753     High  
cufflinks 9.906     High  
cufflinks 24.116     High High
cufflinks 12.184     High  
cufflinks 7.438     High Low
cufflinks 8.047     High Low
cufflinks 13.906     High  
cufflinks 7.106       Low
cufflinks 7.889     High Low
cufflinks 14.418     High  
cufflinks 9.066     High  
cufflinks 17.17     High High

0 Strain