Gene : Glyma.11G221600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10811//PTHR10811:SF14 - FRINGE-RELATED Genomic Order:  2216
Name:  ? Glyma.11G221600 Secondary Identifier:  ? PAC:30527887
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G221600 0.5kb upstream 0.5kb upstream 2624 true Chr11: 31683837-31686460 Glycine max
Glyma.11G221600 0.5kb upstream 0.5kb upstream 500 false Chr11: 31683837-31684336 Glycine max
Glyma.11G221600 0.5kb downstream 0.5kb downstream 2624 true Chr11: 31684337-31686960 Glycine max
Glyma.11G221600 0.5kb downstream 0.5kb downstream 500 false Chr11: 31686461-31686960 Glycine max
Glyma.11G221600 1.0kb upstream 1.0kb upstream 3124 true Chr11: 31683337-31686460 Glycine max
Glyma.11G221600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31683337-31684336 Glycine max
Glyma.11G221600 1.0kb downstream 1.0kb downstream 3124 true Chr11: 31684337-31687460 Glycine max
Glyma.11G221600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31686461-31687460 Glycine max
Glyma.11G221600 2.0kb upstream 2.0kb upstream 4124 true Chr11: 31682337-31686460 Glycine max
Glyma.11G221600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31682337-31684336 Glycine max
Glyma.11G221600 2.0kb downstream 2.0kb downstream 4124 true Chr11: 31684337-31688460 Glycine max
Glyma.11G221600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31686461-31688460 Glycine max
Glyma.11G221600 5.0kb upstream 5.0kb upstream 7124 true Chr11: 31679337-31686460 Glycine max
Glyma.11G221600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31679337-31684336 Glycine max
Glyma.11G221600 5.0kb downstream 5.0kb downstream 7124 true Chr11: 31684337-31691460 Glycine max
Glyma.11G221600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31686461-31691460 Glycine max
Glyma.11G221600 10.0kb upstream 10.0kb upstream 12124 true Chr11: 31674337-31686460 Glycine max
Glyma.11G221600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31674337-31684336 Glycine max
Glyma.11G221600 10.0kb downstream 10.0kb downstream 12124 true Chr11: 31684337-31696460 Glycine max
Glyma.11G221600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31686461-31696460 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304361 5265 Fabidae View MSA
124070158 5270 Rosid View MSA
123749213 5271 Pentapetalae View MSA
122793908 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.224024 0.0 0.871686    
cufflinks 0.962926 0.0 3.49358    
cufflinks 0.146417 0.0 0.5779 Low Low
cufflinks 0.899489 0.0 3.27434    
cufflinks 1.11474 0.0 4.00568    
cufflinks 0.384323 0.0 1.4606    
cufflinks 0.120529 0.0 0.479755 Low Low
cufflinks 1.41096 0.0 4.97561   High
cufflinks 0.740053 0.0 2.72379    
cufflinks 0.377        
cufflinks 0.456        
cufflinks 0.507        
cufflinks 0.318        
cufflinks 0.1       Low
cufflinks 0.052     Low Low
cufflinks 0.317        
cufflinks 0.089       Low
cufflinks 0.616        
cufflinks 1.109       High
cufflinks 0.372        
cufflinks 0.493        
cufflinks 0.457        
cufflinks 0.221        
cufflinks 0.884       High
cufflinks 0.466        
cufflinks 0.21        

0 Strain