Gene : Glyma.11G222900 G. max Wm82.a2.v1
Defline:  (1 of 24) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2229
Name:  ? Glyma.11G222900 Secondary Identifier:  ? PAC:30528718
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G222900 0.5kb upstream 0.5kb upstream 6018 true Chr11: 31801557-31807574 Glycine max
Glyma.11G222900 0.5kb upstream 0.5kb upstream 500 false Chr11: 31801557-31802056 Glycine max
Glyma.11G222900 0.5kb downstream 0.5kb downstream 6018 true Chr11: 31802057-31808074 Glycine max
Glyma.11G222900 0.5kb downstream 0.5kb downstream 500 false Chr11: 31807575-31808074 Glycine max
Glyma.11G222900 1.0kb upstream 1.0kb upstream 6518 true Chr11: 31801057-31807574 Glycine max
Glyma.11G222900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31801057-31802056 Glycine max
Glyma.11G222900 1.0kb downstream 1.0kb downstream 6518 true Chr11: 31802057-31808574 Glycine max
Glyma.11G222900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31807575-31808574 Glycine max
Glyma.11G222900 2.0kb upstream 2.0kb upstream 7518 true Chr11: 31800057-31807574 Glycine max
Glyma.11G222900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31800057-31802056 Glycine max
Glyma.11G222900 2.0kb downstream 2.0kb downstream 7518 true Chr11: 31802057-31809574 Glycine max
Glyma.11G222900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31807575-31809574 Glycine max
Glyma.11G222900 5.0kb upstream 5.0kb upstream 10518 true Chr11: 31797057-31807574 Glycine max
Glyma.11G222900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31797057-31802056 Glycine max
Glyma.11G222900 5.0kb downstream 5.0kb downstream 10518 true Chr11: 31802057-31812574 Glycine max
Glyma.11G222900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31807575-31812574 Glycine max
Glyma.11G222900 10.0kb upstream 10.0kb upstream 15518 true Chr11: 31792057-31807574 Glycine max
Glyma.11G222900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31792057-31802056 Glycine max
Glyma.11G222900 10.0kb downstream 10.0kb downstream 15518 true Chr11: 31802057-31817574 Glycine max
Glyma.11G222900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31807575-31817574 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302380 5265 Fabidae View MSA
124067475 5270 Rosid View MSA
123739002 5271 Pentapetalae View MSA
122796766 5272 Eudicot View MSA
122042496 5273 Angiosperm View MSA
121309979 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4807 0.0 63.1113    
cufflinks 15.6308 0.0 53.6813    
cufflinks 31.827 0.0 113.267 High High
cufflinks 14.8756 0.0 51.3855    
cufflinks 14.6481 0.0 50.476    
cufflinks 20.2875 0.0 69.7492    
cufflinks 18.7366 0.0 64.0679    
cufflinks 14.1157 0.0 48.4998    
cufflinks 14.8041 0.0 50.7633    
cufflinks 1.946       Low
cufflinks 4.491       High
cufflinks 3.466        
cufflinks 2.167        
cufflinks 1.627       Low
cufflinks 3.636        
cufflinks 2.545        
cufflinks 3.8        
cufflinks 2.67        
cufflinks 2.761        
cufflinks 2.407        
cufflinks 3.61        
cufflinks 2.553        
cufflinks 2.122        
cufflinks 5.398       High
cufflinks 2.39        
cufflinks 4.099       High

0 Strain