Gene : Glyma.11G226500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20902 - 41-2 PROTEIN ANTIGEN-RELATED Genomic Order:  2265
Name:  ? Glyma.11G226500 Secondary Identifier:  ? PAC:30529717
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G226500 0.5kb upstream 0.5kb upstream 5529 true Chr11: 32158221-32163749 Glycine max
Glyma.11G226500 0.5kb upstream 0.5kb upstream 500 false Chr11: 32158221-32158720 Glycine max
Glyma.11G226500 0.5kb downstream 0.5kb downstream 5529 true Chr11: 32158721-32164249 Glycine max
Glyma.11G226500 0.5kb downstream 0.5kb downstream 500 false Chr11: 32163750-32164249 Glycine max
Glyma.11G226500 1.0kb upstream 1.0kb upstream 6029 true Chr11: 32157721-32163749 Glycine max
Glyma.11G226500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32157721-32158720 Glycine max
Glyma.11G226500 1.0kb downstream 1.0kb downstream 6029 true Chr11: 32158721-32164749 Glycine max
Glyma.11G226500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32163750-32164749 Glycine max
Glyma.11G226500 2.0kb upstream 2.0kb upstream 7029 true Chr11: 32156721-32163749 Glycine max
Glyma.11G226500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32156721-32158720 Glycine max
Glyma.11G226500 2.0kb downstream 2.0kb downstream 7029 true Chr11: 32158721-32165749 Glycine max
Glyma.11G226500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32163750-32165749 Glycine max
Glyma.11G226500 5.0kb upstream 5.0kb upstream 10029 true Chr11: 32153721-32163749 Glycine max
Glyma.11G226500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32153721-32158720 Glycine max
Glyma.11G226500 5.0kb downstream 5.0kb downstream 10029 true Chr11: 32158721-32168749 Glycine max
Glyma.11G226500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32163750-32168749 Glycine max
Glyma.11G226500 10.0kb upstream 10.0kb upstream 15029 true Chr11: 32148721-32163749 Glycine max
Glyma.11G226500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32148721-32158720 Glycine max
Glyma.11G226500 10.0kb downstream 10.0kb downstream 15029 true Chr11: 32158721-32173749 Glycine max
Glyma.11G226500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32163750-32173749 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314696 5265 Fabidae View MSA
124065767 5270 Rosid View MSA
123745459 5271 Pentapetalae View MSA
122785825 5272 Eudicot View MSA
122045467 5273 Angiosperm View MSA
121344565 5274 Embryophyte View MSA
123425941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0353 0.0 44.8873   Low
cufflinks 18.4701 0.0 56.5993    
cufflinks 14.4473 0.0 45.7503   Low
cufflinks 24.9849 0.0 86.4207 High  
cufflinks 22.2202 0.0 66.8624 High  
cufflinks 25.1164 0.0 75.4082 High  
cufflinks 23.2582 0.0 79.9203 High  
cufflinks 27.5327 0.0 81.8479 High High
cufflinks 21.0868 0.0 63.8224 High  
cufflinks 2.627        
cufflinks 0.706       Low
cufflinks 2.078        
cufflinks 3.395       High
cufflinks 4.092       High
cufflinks 0.682       Low
cufflinks 1.734        
cufflinks 1.272        
cufflinks 2.633        
cufflinks 2.387        
cufflinks 1.442        
cufflinks 1.081        
cufflinks 1.551        
cufflinks 1.809        
cufflinks 1.064        
cufflinks 1.579        
cufflinks 1.238        

0 Strain