Gene : Glyma.11G215100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR28620:SF1 - PROTEIN F25B4.8, ISOFORM A Genomic Order:  2151
Name:  ? Glyma.11G215100 Secondary Identifier:  ? PAC:30530785
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G215100 0.5kb upstream 0.5kb upstream 2736 true Chr11: 30833952-30836687 Glycine max
Glyma.11G215100 0.5kb upstream 0.5kb upstream 500 false Chr11: 30836188-30836687 Glycine max
Glyma.11G215100 0.5kb downstream 0.5kb downstream 2736 true Chr11: 30833452-30836187 Glycine max
Glyma.11G215100 0.5kb downstream 0.5kb downstream 500 false Chr11: 30833452-30833951 Glycine max
Glyma.11G215100 1.0kb upstream 1.0kb upstream 3236 true Chr11: 30833952-30837187 Glycine max
Glyma.11G215100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 30836188-30837187 Glycine max
Glyma.11G215100 1.0kb downstream 1.0kb downstream 3236 true Chr11: 30832952-30836187 Glycine max
Glyma.11G215100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 30832952-30833951 Glycine max
Glyma.11G215100 2.0kb upstream 2.0kb upstream 4236 true Chr11: 30833952-30838187 Glycine max
Glyma.11G215100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 30836188-30838187 Glycine max
Glyma.11G215100 2.0kb downstream 2.0kb downstream 4236 true Chr11: 30831952-30836187 Glycine max
Glyma.11G215100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 30831952-30833951 Glycine max
Glyma.11G215100 5.0kb upstream 5.0kb upstream 7236 true Chr11: 30833952-30841187 Glycine max
Glyma.11G215100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 30836188-30841187 Glycine max
Glyma.11G215100 5.0kb downstream 5.0kb downstream 7236 true Chr11: 30828952-30836187 Glycine max
Glyma.11G215100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 30828952-30833951 Glycine max
Glyma.11G215100 10.0kb upstream 10.0kb upstream 12236 true Chr11: 30833952-30846187 Glycine max
Glyma.11G215100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 30836188-30846187 Glycine max
Glyma.11G215100 10.0kb downstream 10.0kb downstream 12236 true Chr11: 30823952-30836187 Glycine max
Glyma.11G215100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 30823952-30833951 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314715 5265 Fabidae View MSA
124068266 5270 Rosid View MSA
123738048 5271 Pentapetalae View MSA
122791227 5272 Eudicot View MSA
122046805 5273 Angiosperm View MSA
121351715 5274 Embryophyte View MSA
123426563 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.79172 0.0 15.7019   Low
cufflinks 9.15769 0.0 27.4309    
cufflinks 5.76175 0.0 18.3237    
cufflinks 7.44596 0.0 22.8863    
cufflinks 8.63429 0.0 26.0224    
cufflinks 8.88565 0.0 26.6479    
cufflinks 14.5064 0.0 40.9792   High
cufflinks 4.23276 0.0 14.0824   Low
cufflinks 6.00313 0.0 19.0572    
cufflinks 1.141        
cufflinks 0.68       Low
cufflinks 2.694       High
cufflinks 3.437       High
cufflinks 3.381       High
cufflinks 1.374        
cufflinks 1.146        
cufflinks 0.796       Low
cufflinks 1.654        
cufflinks 2.979       High
cufflinks 1.157        
cufflinks 0.869        
cufflinks 1.099        
cufflinks 1.389        
cufflinks 0.972        
cufflinks 1.165        
cufflinks 0.815       Low

0 Strain