Gene : Glyma.11G216900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23180//PTHR23180:SF285 - CENTAURIN/ARF Genomic Order:  2169
Name:  ? Glyma.11G216900 Secondary Identifier:  ? PAC:30529105
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G216900 0.5kb upstream 0.5kb upstream 2955 true Chr11: 31154307-31157261 Glycine max
Glyma.11G216900 0.5kb upstream 0.5kb upstream 500 false Chr11: 31156762-31157261 Glycine max
Glyma.11G216900 0.5kb downstream 0.5kb downstream 2955 true Chr11: 31153807-31156761 Glycine max
Glyma.11G216900 0.5kb downstream 0.5kb downstream 500 false Chr11: 31153807-31154306 Glycine max
Glyma.11G216900 1.0kb upstream 1.0kb upstream 3455 true Chr11: 31154307-31157761 Glycine max
Glyma.11G216900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31156762-31157761 Glycine max
Glyma.11G216900 1.0kb downstream 1.0kb downstream 3455 true Chr11: 31153307-31156761 Glycine max
Glyma.11G216900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31153307-31154306 Glycine max
Glyma.11G216900 2.0kb upstream 2.0kb upstream 4455 true Chr11: 31154307-31158761 Glycine max
Glyma.11G216900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31156762-31158761 Glycine max
Glyma.11G216900 2.0kb downstream 2.0kb downstream 4455 true Chr11: 31152307-31156761 Glycine max
Glyma.11G216900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31152307-31154306 Glycine max
Glyma.11G216900 5.0kb upstream 5.0kb upstream 7455 true Chr11: 31154307-31161761 Glycine max
Glyma.11G216900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31156762-31161761 Glycine max
Glyma.11G216900 5.0kb downstream 5.0kb downstream 7455 true Chr11: 31149307-31156761 Glycine max
Glyma.11G216900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31149307-31154306 Glycine max
Glyma.11G216900 10.0kb upstream 10.0kb upstream 12455 true Chr11: 31154307-31166761 Glycine max
Glyma.11G216900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31156762-31166761 Glycine max
Glyma.11G216900 10.0kb downstream 10.0kb downstream 12455 true Chr11: 31144307-31156761 Glycine max
Glyma.11G216900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31144307-31154306 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302781 5265 Fabidae View MSA
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 94.1517 0.0 265.002 High High
cufflinks 21.0226 0.0 56.7909 High  
cufflinks 25.4007 0.0 67.991 High  
cufflinks 11.1277 0.0 31.6376    
cufflinks 10.7311 0.0 30.7428    
cufflinks 61.1586 0.0 165.971 High High
cufflinks 9.03431 0.0 26.4771   Low
cufflinks 14.1514 0.0 39.2583    
cufflinks 18.707 0.0 50.8573    
cufflinks 10.804     High  
cufflinks 10.01     High  
cufflinks 9.542     High  
cufflinks 13.654     High  
cufflinks 2.387       Low
cufflinks 10.715     High  
cufflinks 16.656     High  
cufflinks 29.772     High High
cufflinks 8.335     High  
cufflinks 11.171     High  
cufflinks 17.19     High  
cufflinks 9.177     High  
cufflinks 20.988     High High
cufflinks 15.881     High  
cufflinks 12.626     High  
cufflinks 15.59     High  
cufflinks 16.729     High  

0 Strain