Gene : Glyma.11G217000 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG4168 - Predicted RNA polymerase III subunit C17 Genomic Order:  2170
Name:  ? Glyma.11G217000 Secondary Identifier:  ? PAC:30529371
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G217000 0.5kb upstream 0.5kb upstream 7685 true Chr11: 31166791-31174475 Glycine max
Glyma.11G217000 0.5kb upstream 0.5kb upstream 500 false Chr11: 31166791-31167290 Glycine max
Glyma.11G217000 0.5kb downstream 0.5kb downstream 7685 true Chr11: 31167291-31174975 Glycine max
Glyma.11G217000 0.5kb downstream 0.5kb downstream 500 false Chr11: 31174476-31174975 Glycine max
Glyma.11G217000 1.0kb upstream 1.0kb upstream 8185 true Chr11: 31166291-31174475 Glycine max
Glyma.11G217000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31166291-31167290 Glycine max
Glyma.11G217000 1.0kb downstream 1.0kb downstream 8185 true Chr11: 31167291-31175475 Glycine max
Glyma.11G217000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31174476-31175475 Glycine max
Glyma.11G217000 2.0kb upstream 2.0kb upstream 9185 true Chr11: 31165291-31174475 Glycine max
Glyma.11G217000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31165291-31167290 Glycine max
Glyma.11G217000 2.0kb downstream 2.0kb downstream 9185 true Chr11: 31167291-31176475 Glycine max
Glyma.11G217000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31174476-31176475 Glycine max
Glyma.11G217000 5.0kb upstream 5.0kb upstream 12185 true Chr11: 31162291-31174475 Glycine max
Glyma.11G217000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31162291-31167290 Glycine max
Glyma.11G217000 5.0kb downstream 5.0kb downstream 12185 true Chr11: 31167291-31179475 Glycine max
Glyma.11G217000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31174476-31179475 Glycine max
Glyma.11G217000 10.0kb upstream 10.0kb upstream 17185 true Chr11: 31157291-31174475 Glycine max
Glyma.11G217000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31157291-31167290 Glycine max
Glyma.11G217000 10.0kb downstream 10.0kb downstream 17185 true Chr11: 31167291-31184475 Glycine max
Glyma.11G217000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31174476-31184475 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305183 5265 Fabidae View MSA
124063506 5270 Rosid View MSA
123740278 5271 Pentapetalae View MSA
122796140 5272 Eudicot View MSA
122047210 5273 Angiosperm View MSA
121347420 5274 Embryophyte View MSA
123427400 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.97862 0.0 28.2262   High
cufflinks 5.40265 0.0 26.1471   High
cufflinks 2.79458 0.0 18.5965   Low
cufflinks 2.5531 0.0 15.84   Low
cufflinks 3.46228 0.0 19.682    
cufflinks 2.97793 0.0 18.21    
cufflinks 5.24292 0.0 25.5871    
cufflinks 4.58049 0.0 23.1771    
cufflinks 3.51049 0.0 20.0695    
cufflinks 0.318       Low
cufflinks 0.447        
cufflinks 0.383       Low
cufflinks 0.629       High
cufflinks 0.664       High
cufflinks 0.625       High
cufflinks 0.466        
cufflinks 0.532        
cufflinks 0.42        
cufflinks 0.621       High
cufflinks 0.5        
cufflinks 0.38       Low
cufflinks 0.538        
cufflinks 0.635       High
cufflinks 0.494        
cufflinks 0.527        
cufflinks 0.44        

0 Strain