Gene : Glyma.11G217200 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Genomic Order:  2172
Name:  ? Glyma.11G217200 Secondary Identifier:  ? PAC:30531460
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G217200 0.5kb upstream 0.5kb upstream 1335 true Chr11: 31174478-31175812 Glycine max
Glyma.11G217200 0.5kb upstream 0.5kb upstream 500 false Chr11: 31175313-31175812 Glycine max
Glyma.11G217200 0.5kb downstream 0.5kb downstream 1335 true Chr11: 31173978-31175312 Glycine max
Glyma.11G217200 0.5kb downstream 0.5kb downstream 500 false Chr11: 31173978-31174477 Glycine max
Glyma.11G217200 1.0kb upstream 1.0kb upstream 1835 true Chr11: 31174478-31176312 Glycine max
Glyma.11G217200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31175313-31176312 Glycine max
Glyma.11G217200 1.0kb downstream 1.0kb downstream 1835 true Chr11: 31173478-31175312 Glycine max
Glyma.11G217200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31173478-31174477 Glycine max
Glyma.11G217200 2.0kb upstream 2.0kb upstream 2835 true Chr11: 31174478-31177312 Glycine max
Glyma.11G217200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31175313-31177312 Glycine max
Glyma.11G217200 2.0kb downstream 2.0kb downstream 2835 true Chr11: 31172478-31175312 Glycine max
Glyma.11G217200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31172478-31174477 Glycine max
Glyma.11G217200 5.0kb upstream 5.0kb upstream 5835 true Chr11: 31174478-31180312 Glycine max
Glyma.11G217200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31175313-31180312 Glycine max
Glyma.11G217200 5.0kb downstream 5.0kb downstream 5835 true Chr11: 31169478-31175312 Glycine max
Glyma.11G217200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31169478-31174477 Glycine max
Glyma.11G217200 10.0kb upstream 10.0kb upstream 10835 true Chr11: 31174478-31185312 Glycine max
Glyma.11G217200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31175313-31185312 Glycine max
Glyma.11G217200 10.0kb downstream 10.0kb downstream 10835 true Chr11: 31164478-31175312 Glycine max
Glyma.11G217200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31164478-31174477 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306413 5265 Fabidae View MSA
124061812 5270 Rosid View MSA
123752217 5271 Pentapetalae View MSA
122794850 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.7586 0.0 53.6054    
cufflinks 18.0395 0.0 49.3568    
cufflinks 38.2147 0.0 101.955 High High
cufflinks 19.448 0.0 52.9222    
cufflinks 11.4381 0.0 32.3324    
cufflinks 17.3843 0.0 47.5902    
cufflinks 13.5937 0.0 37.9252    
cufflinks 14.12 0.0 39.4165    
cufflinks 3.14673 0.0 10.6501   Low
cufflinks 66.05     High High
cufflinks 5.138        
cufflinks 85.108     High High
cufflinks 22.368     High  
cufflinks 15.348     High  
cufflinks 0.782       Low
cufflinks 29.549     High  
cufflinks 35.452     High  
cufflinks 37.846     High  
cufflinks 21.514     High  
cufflinks 16.619     High  
cufflinks 2.176       Low
cufflinks 25.643     High  
cufflinks 33.295     High  
cufflinks 2.225       Low
cufflinks 25.433     High  
cufflinks 7.428     High  

0 Strain