Gene : Glyma.11G204300 G. max Wm82.a2.v1
Defline:  (1 of 8) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  2043
Name:  ? Glyma.11G204300 Secondary Identifier:  ? PAC:30527827
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G204300 0.5kb upstream 0.5kb upstream 2563 true Chr11: 28436449-28439011 Glycine max
Glyma.11G204300 0.5kb upstream 0.5kb upstream 500 false Chr11: 28436449-28436948 Glycine max
Glyma.11G204300 0.5kb downstream 0.5kb downstream 2563 true Chr11: 28436949-28439511 Glycine max
Glyma.11G204300 0.5kb downstream 0.5kb downstream 500 false Chr11: 28439012-28439511 Glycine max
Glyma.11G204300 1.0kb upstream 1.0kb upstream 3063 true Chr11: 28435949-28439011 Glycine max
Glyma.11G204300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 28435949-28436948 Glycine max
Glyma.11G204300 1.0kb downstream 1.0kb downstream 3063 true Chr11: 28436949-28440011 Glycine max
Glyma.11G204300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 28439012-28440011 Glycine max
Glyma.11G204300 2.0kb upstream 2.0kb upstream 4063 true Chr11: 28434949-28439011 Glycine max
Glyma.11G204300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 28434949-28436948 Glycine max
Glyma.11G204300 2.0kb downstream 2.0kb downstream 4063 true Chr11: 28436949-28441011 Glycine max
Glyma.11G204300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 28439012-28441011 Glycine max
Glyma.11G204300 5.0kb upstream 5.0kb upstream 7063 true Chr11: 28431949-28439011 Glycine max
Glyma.11G204300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 28431949-28436948 Glycine max
Glyma.11G204300 5.0kb downstream 5.0kb downstream 7063 true Chr11: 28436949-28444011 Glycine max
Glyma.11G204300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 28439012-28444011 Glycine max
Glyma.11G204300 10.0kb upstream 10.0kb upstream 12063 true Chr11: 28426949-28439011 Glycine max
Glyma.11G204300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 28426949-28436948 Glycine max
Glyma.11G204300 10.0kb downstream 10.0kb downstream 12063 true Chr11: 28436949-28449011 Glycine max
Glyma.11G204300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 28439012-28449011 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312972 5265 Fabidae View MSA
124068012 5270 Rosid View MSA
123738573 5271 Pentapetalae View MSA
122791762 5272 Eudicot View MSA
122049164 5273 Angiosperm View MSA
121311275 5274 Embryophyte View MSA
123348590 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.63734 0.0 12.4901    
cufflinks 3.43735 0.0 11.9751    
cufflinks 4.76779 0.0 19.5193   High
cufflinks 2.99457 0.0 15.4972    
cufflinks 0.920152 0.0 4.25804    
cufflinks 0.412867 0.0 2.00282   Low
cufflinks 2.51401 0.0 9.45979    
cufflinks 1.16216 0.0 5.2267    
cufflinks 0.724912 0.0 3.42564   Low
cufflinks 0.746        
cufflinks 0.284        
cufflinks 1.834        
cufflinks 0.097       Low
cufflinks 0.114       Low
cufflinks 0.394        
cufflinks 4.087       High
cufflinks 0.092       Low
cufflinks 2.005        
cufflinks 1.314        
cufflinks 6.002       High
cufflinks 0.234        
cufflinks 5.37       High
cufflinks 4.354       High
cufflinks 0.251        
cufflinks 4.617       High
cufflinks 0.081       Low

0 Strain