Gene : Glyma.11G209600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13046 - PROTEASE U48 CAAX PRENYL PROTEASE RCE1 Genomic Order:  2096
Name:  ? Glyma.11G209600 Secondary Identifier:  ? PAC:30530404
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G209600 0.5kb upstream 0.5kb upstream 12289 true Chr11: 30146795-30159083 Glycine max
Glyma.11G209600 0.5kb upstream 0.5kb upstream 500 false Chr11: 30146795-30147294 Glycine max
Glyma.11G209600 0.5kb downstream 0.5kb downstream 12289 true Chr11: 30147295-30159583 Glycine max
Glyma.11G209600 0.5kb downstream 0.5kb downstream 500 false Chr11: 30159084-30159583 Glycine max
Glyma.11G209600 1.0kb upstream 1.0kb upstream 12789 true Chr11: 30146295-30159083 Glycine max
Glyma.11G209600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 30146295-30147294 Glycine max
Glyma.11G209600 1.0kb downstream 1.0kb downstream 12789 true Chr11: 30147295-30160083 Glycine max
Glyma.11G209600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 30159084-30160083 Glycine max
Glyma.11G209600 2.0kb upstream 2.0kb upstream 13789 true Chr11: 30145295-30159083 Glycine max
Glyma.11G209600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 30145295-30147294 Glycine max
Glyma.11G209600 2.0kb downstream 2.0kb downstream 13789 true Chr11: 30147295-30161083 Glycine max
Glyma.11G209600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 30159084-30161083 Glycine max
Glyma.11G209600 5.0kb upstream 5.0kb upstream 16789 true Chr11: 30142295-30159083 Glycine max
Glyma.11G209600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 30142295-30147294 Glycine max
Glyma.11G209600 5.0kb downstream 5.0kb downstream 16789 true Chr11: 30147295-30164083 Glycine max
Glyma.11G209600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 30159084-30164083 Glycine max
Glyma.11G209600 10.0kb upstream 10.0kb upstream 21789 true Chr11: 30137295-30159083 Glycine max
Glyma.11G209600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 30137295-30147294 Glycine max
Glyma.11G209600 10.0kb downstream 10.0kb downstream 21789 true Chr11: 30147295-30169083 Glycine max
Glyma.11G209600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 30159084-30169083 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299948 5265 Fabidae View MSA
124065582 5270 Rosid View MSA
123749643 5271 Pentapetalae View MSA
122792764 5272 Eudicot View MSA
122044931 5273 Angiosperm View MSA
121347066 5274 Embryophyte View MSA
123424467 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.35849 0.0 21.6801   Low
cufflinks 6.44106 0.0 24.4523    
cufflinks 3.84352 0.0 19.7999   Low
cufflinks 6.59626 0.0 28.6537    
cufflinks 6.74822 0.0 24.7194    
cufflinks 5.24893 0.0 24.6658    
cufflinks 7.59619 0.0 36.0901   High
cufflinks 5.99699 0.0 26.586    
cufflinks 6.83228 0.0 33.3196    
cufflinks 0.109        
cufflinks 0.027     Low Low
cufflinks 0.126        
cufflinks 0.146        
cufflinks 0.164       High
cufflinks 0.079        
cufflinks 0.102        
cufflinks 0.078        
cufflinks 0.144        
cufflinks 0.177       High
cufflinks 0.11        
cufflinks 0.044     Low Low
cufflinks 0.125        
cufflinks 0.132        
cufflinks 0.04     Low Low
cufflinks 0.111        
cufflinks 0.059     Low  

0 Strain