Gene : Glyma.11G253300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11413:SF38 - CYSTEINE PROTEINASE INHIBITOR 2 Genomic Order:  2533
Name:  ? Glyma.11G253300 Secondary Identifier:  ? PAC:30529681
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G253300 0.5kb upstream 0.5kb upstream 1349 true Chr11: 34413583-34414931 Glycine max
Glyma.11G253300 0.5kb upstream 0.5kb upstream 500 false Chr11: 34414432-34414931 Glycine max
Glyma.11G253300 0.5kb downstream 0.5kb downstream 1349 true Chr11: 34413083-34414431 Glycine max
Glyma.11G253300 0.5kb downstream 0.5kb downstream 500 false Chr11: 34413083-34413582 Glycine max
Glyma.11G253300 1.0kb upstream 1.0kb upstream 1849 true Chr11: 34413583-34415431 Glycine max
Glyma.11G253300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34414432-34415431 Glycine max
Glyma.11G253300 1.0kb downstream 1.0kb downstream 1849 true Chr11: 34412583-34414431 Glycine max
Glyma.11G253300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34412583-34413582 Glycine max
Glyma.11G253300 2.0kb upstream 2.0kb upstream 2849 true Chr11: 34413583-34416431 Glycine max
Glyma.11G253300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34414432-34416431 Glycine max
Glyma.11G253300 2.0kb downstream 2.0kb downstream 2849 true Chr11: 34411583-34414431 Glycine max
Glyma.11G253300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34411583-34413582 Glycine max
Glyma.11G253300 5.0kb upstream 5.0kb upstream 5849 true Chr11: 34413583-34419431 Glycine max
Glyma.11G253300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34414432-34419431 Glycine max
Glyma.11G253300 5.0kb downstream 5.0kb downstream 5849 true Chr11: 34408583-34414431 Glycine max
Glyma.11G253300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34408583-34413582 Glycine max
Glyma.11G253300 10.0kb upstream 10.0kb upstream 10849 true Chr11: 34413583-34424431 Glycine max
Glyma.11G253300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34414432-34424431 Glycine max
Glyma.11G253300 10.0kb downstream 10.0kb downstream 10849 true Chr11: 34403583-34414431 Glycine max
Glyma.11G253300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34403583-34413582 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305178 5265 Fabidae View MSA
124069971 5270 Rosid View MSA
123746395 5271 Pentapetalae View MSA
122797180 5272 Eudicot View MSA
122051666 5273 Angiosperm View MSA
121351690 5274 Embryophyte View MSA
123426487 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.93815 0.0 10.197    
cufflinks 3.16955 0.0 10.9384    
cufflinks 243.649 0.0 767.349 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.019     Low Low
cufflinks 0.173        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.148        
cufflinks 0.1        
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.865       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.578        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.24        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.95       High

0 Strain