Gene : Glyma.11G254100 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  2541
Name:  ? Glyma.11G254100 Secondary Identifier:  ? PAC:30530624
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6622 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G254100 0.5kb upstream 0.5kb upstream 11861 true Chr11: 34462844-34474704 Glycine max
Glyma.11G254100 0.5kb upstream 0.5kb upstream 500 false Chr11: 34462844-34463343 Glycine max
Glyma.11G254100 0.5kb downstream 0.5kb downstream 11861 true Chr11: 34463344-34475204 Glycine max
Glyma.11G254100 0.5kb downstream 0.5kb downstream 500 false Chr11: 34474705-34475204 Glycine max
Glyma.11G254100 1.0kb upstream 1.0kb upstream 12361 true Chr11: 34462344-34474704 Glycine max
Glyma.11G254100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34462344-34463343 Glycine max
Glyma.11G254100 1.0kb downstream 1.0kb downstream 12361 true Chr11: 34463344-34475704 Glycine max
Glyma.11G254100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34474705-34475704 Glycine max
Glyma.11G254100 2.0kb upstream 2.0kb upstream 13361 true Chr11: 34461344-34474704 Glycine max
Glyma.11G254100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34461344-34463343 Glycine max
Glyma.11G254100 2.0kb downstream 2.0kb downstream 13361 true Chr11: 34463344-34476704 Glycine max
Glyma.11G254100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34474705-34476704 Glycine max
Glyma.11G254100 5.0kb upstream 5.0kb upstream 16361 true Chr11: 34458344-34474704 Glycine max
Glyma.11G254100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34458344-34463343 Glycine max
Glyma.11G254100 5.0kb downstream 5.0kb downstream 16361 true Chr11: 34463344-34479704 Glycine max
Glyma.11G254100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34474705-34479704 Glycine max
Glyma.11G254100 10.0kb upstream 10.0kb upstream 21361 true Chr11: 34453344-34474704 Glycine max
Glyma.11G254100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34453344-34463343 Glycine max
Glyma.11G254100 10.0kb downstream 10.0kb downstream 21361 true Chr11: 34463344-34484704 Glycine max
Glyma.11G254100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34474705-34484704 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310113 5265 Fabidae View MSA
124063017 5270 Rosid View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.0129 0.0 116.804 High High
cufflinks 4.05827 0.0 17.5263    
cufflinks 16.6717 0.0 61.5949   High
cufflinks 2.88197 0.0 10.8019    
cufflinks 4.65688 0.0 19.4365    
cufflinks 6.80739 0.0 25.515    
cufflinks 2.05368 0.0 10.4891   Low
cufflinks 4.18459 0.0 14.2051    
cufflinks 4.63461 0.0 15.4521    
cufflinks 0.736       Low
cufflinks 2.034        
cufflinks 1.345        
cufflinks 1.113        
cufflinks 0.77       Low
cufflinks 0.9       Low
cufflinks 1.511        
cufflinks 1.752        
cufflinks 0.765       Low
cufflinks 1.021        
cufflinks 1.609        
cufflinks 2.107       High
cufflinks 2.083       High
cufflinks 1.344        
cufflinks 2.603       High
cufflinks 1.179        
cufflinks 2.284       High

0 Strain