Gene : Glyma.11G255600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22957//PTHR22957:SF329 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Genomic Order:  2556
Name:  ? Glyma.11G255600 Secondary Identifier:  ? PAC:30531638
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G255600 0.5kb upstream 0.5kb upstream 5420 true Chr11: 34564091-34569510 Glycine max
Glyma.11G255600 0.5kb upstream 0.5kb upstream 500 false Chr11: 34569011-34569510 Glycine max
Glyma.11G255600 0.5kb downstream 0.5kb downstream 5420 true Chr11: 34563591-34569010 Glycine max
Glyma.11G255600 0.5kb downstream 0.5kb downstream 500 false Chr11: 34563591-34564090 Glycine max
Glyma.11G255600 1.0kb upstream 1.0kb upstream 5920 true Chr11: 34564091-34570010 Glycine max
Glyma.11G255600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34569011-34570010 Glycine max
Glyma.11G255600 1.0kb downstream 1.0kb downstream 5920 true Chr11: 34563091-34569010 Glycine max
Glyma.11G255600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34563091-34564090 Glycine max
Glyma.11G255600 2.0kb upstream 2.0kb upstream 6920 true Chr11: 34564091-34571010 Glycine max
Glyma.11G255600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34569011-34571010 Glycine max
Glyma.11G255600 2.0kb downstream 2.0kb downstream 6920 true Chr11: 34562091-34569010 Glycine max
Glyma.11G255600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34562091-34564090 Glycine max
Glyma.11G255600 5.0kb upstream 5.0kb upstream 9920 true Chr11: 34564091-34574010 Glycine max
Glyma.11G255600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34569011-34574010 Glycine max
Glyma.11G255600 5.0kb downstream 5.0kb downstream 9920 true Chr11: 34559091-34569010 Glycine max
Glyma.11G255600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34559091-34564090 Glycine max
Glyma.11G255600 10.0kb upstream 10.0kb upstream 14920 true Chr11: 34564091-34579010 Glycine max
Glyma.11G255600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34569011-34579010 Glycine max
Glyma.11G255600 10.0kb downstream 10.0kb downstream 14920 true Chr11: 34554091-34569010 Glycine max
Glyma.11G255600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34554091-34564090 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297611 5265 Fabidae View MSA
124070393 5270 Rosid View MSA
123742752 5271 Pentapetalae View MSA
122794560 5272 Eudicot View MSA
122050353 5273 Angiosperm View MSA
121347647 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.69309 0.0 21.7099    
cufflinks 5.69798 0.0 16.6387    
cufflinks 7.65216 0.0 21.5647    
cufflinks 6.17833 0.0 17.8678    
cufflinks 4.88206 0.0 14.5603    
cufflinks 3.9919 0.0 12.2344   Low
cufflinks 11.3446 0.0 31.0017   High
cufflinks 5.57515 0.0 16.3117    
cufflinks 4.49884 0.0 13.5419    
cufflinks 1.615       Low
cufflinks 1.951        
cufflinks 2.649        
cufflinks 1.76       Low
cufflinks 1.523       Low
cufflinks 2.359        
cufflinks 3.836       High
cufflinks 1.848        
cufflinks 3.057        
cufflinks 3.141        
cufflinks 3.984       High
cufflinks 2.047        
cufflinks 4.3       High
cufflinks 3.7       High
cufflinks 2.099        
cufflinks 3.658       High
cufflinks 1.924        

0 Strain