Gene : Glyma.12G000800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12899//PTHR12899:SF7 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL Genomic Order:  8
Name:  ? Glyma.12G000800 Secondary Identifier:  ? PAC:30547191
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G000800 0.5kb upstream 0.5kb upstream 2032 true Chr12: 60639-62670 Glycine max
Glyma.12G000800 0.5kb upstream 0.5kb upstream 500 false Chr12: 60639-61138 Glycine max
Glyma.12G000800 0.5kb downstream 0.5kb downstream 2032 true Chr12: 61139-63170 Glycine max
Glyma.12G000800 0.5kb downstream 0.5kb downstream 500 false Chr12: 62671-63170 Glycine max
Glyma.12G000800 1.0kb upstream 1.0kb upstream 2532 true Chr12: 60139-62670 Glycine max
Glyma.12G000800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 60139-61138 Glycine max
Glyma.12G000800 1.0kb downstream 1.0kb downstream 2532 true Chr12: 61139-63670 Glycine max
Glyma.12G000800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 62671-63670 Glycine max
Glyma.12G000800 2.0kb upstream 2.0kb upstream 3532 true Chr12: 59139-62670 Glycine max
Glyma.12G000800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 59139-61138 Glycine max
Glyma.12G000800 2.0kb downstream 2.0kb downstream 3532 true Chr12: 61139-64670 Glycine max
Glyma.12G000800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 62671-64670 Glycine max
Glyma.12G000800 5.0kb upstream 5.0kb upstream 6532 true Chr12: 56139-62670 Glycine max
Glyma.12G000800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 56139-61138 Glycine max
Glyma.12G000800 5.0kb downstream 5.0kb downstream 6532 true Chr12: 61139-67670 Glycine max
Glyma.12G000800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 62671-67670 Glycine max
Glyma.12G000800 10.0kb upstream 10.0kb upstream 11532 true Chr12: 51139-62670 Glycine max
Glyma.12G000800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 51139-61138 Glycine max
Glyma.12G000800 10.0kb downstream 10.0kb downstream 11532 true Chr12: 61139-72670 Glycine max
Glyma.12G000800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 62671-72670 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303153 5265 Fabidae View MSA
124062094 5270 Rosid View MSA
123739656 5271 Pentapetalae View MSA
122787801 5272 Eudicot View MSA
122044038 5273 Angiosperm View MSA
121345131 5274 Embryophyte View MSA
123428536 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0988 0.0 47.4146    
cufflinks 21.2216 0.0 57.8285 High High
cufflinks 7.94689 0.0 24.1152   Low
cufflinks 14.6683 0.0 41.2279    
cufflinks 9.65468 0.0 28.5584    
cufflinks 6.41769 0.0 20.0949   Low
cufflinks 11.8321 0.0 34.2152    
cufflinks 20.3943 0.0 55.6893   High
cufflinks 9.28363 0.0 27.5634    
cufflinks 10.395     High High
cufflinks 2.668       Low
cufflinks 5.12        
cufflinks 3.114        
cufflinks 4.108        
cufflinks 3.246        
cufflinks 9.045     High  
cufflinks 2.486       Low
cufflinks 6.124        
cufflinks 8.971     High  
cufflinks 9.223     High  
cufflinks 3.781        
cufflinks 9.024     High  
cufflinks 11.956     High High
cufflinks 3.049        
cufflinks 9.554     High High
cufflinks 2.027       Low

0 Strain