Gene : Glyma.12G001200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11200:SF136 - PHOSPHOINOSITIDE PHOSPHATASE SAC1 Genomic Order:  12
Name:  ? Glyma.12G001200 Secondary Identifier:  ? PAC:30548390
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G001200 0.5kb upstream 0.5kb upstream 12381 true Chr12: 87212-99592 Glycine max
Glyma.12G001200 0.5kb upstream 0.5kb upstream 500 false Chr12: 99093-99592 Glycine max
Glyma.12G001200 0.5kb downstream 0.5kb downstream 12381 true Chr12: 86712-99092 Glycine max
Glyma.12G001200 0.5kb downstream 0.5kb downstream 500 false Chr12: 86712-87211 Glycine max
Glyma.12G001200 1.0kb upstream 1.0kb upstream 12881 true Chr12: 87212-100092 Glycine max
Glyma.12G001200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 99093-100092 Glycine max
Glyma.12G001200 1.0kb downstream 1.0kb downstream 12881 true Chr12: 86212-99092 Glycine max
Glyma.12G001200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 86212-87211 Glycine max
Glyma.12G001200 2.0kb upstream 2.0kb upstream 13881 true Chr12: 87212-101092 Glycine max
Glyma.12G001200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 99093-101092 Glycine max
Glyma.12G001200 2.0kb downstream 2.0kb downstream 13881 true Chr12: 85212-99092 Glycine max
Glyma.12G001200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 85212-87211 Glycine max
Glyma.12G001200 5.0kb upstream 5.0kb upstream 16881 true Chr12: 87212-104092 Glycine max
Glyma.12G001200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 99093-104092 Glycine max
Glyma.12G001200 5.0kb downstream 5.0kb downstream 16881 true Chr12: 82212-99092 Glycine max
Glyma.12G001200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 82212-87211 Glycine max
Glyma.12G001200 10.0kb upstream 10.0kb upstream 21881 true Chr12: 87212-109092 Glycine max
Glyma.12G001200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 99093-109092 Glycine max
Glyma.12G001200 10.0kb downstream 10.0kb downstream 21881 true Chr12: 77212-99092 Glycine max
Glyma.12G001200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 77212-87211 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308336 5265 Fabidae View MSA
124074413 5270 Rosid View MSA
123737573 5271 Pentapetalae View MSA
122791865 5272 Eudicot View MSA
122047437 5273 Angiosperm View MSA
121350498 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.82151 0.0 30.204    
cufflinks 6.95357 0.0 20.9072    
cufflinks 12.4666 0.0 42.655   High
cufflinks 7.03783 0.0 21.9359    
cufflinks 8.1901 0.0 24.36    
cufflinks 10.5164 0.0 31.1214   High
cufflinks 5.56995 0.0 17.1617   Low
cufflinks 7.3499 0.0 25.3247    
cufflinks 7.03755 0.0 24.3557    
cufflinks 1.067       Low
cufflinks 1.258        
cufflinks 1.297        
cufflinks 1.372        
cufflinks 1.242        
cufflinks 1.113       Low
cufflinks 1.356        
cufflinks 1.036       Low
cufflinks 1.565       High
cufflinks 1.436        
cufflinks 1.625       High
cufflinks 1.207        
cufflinks 1.569       High
cufflinks 0.974       Low
cufflinks 1.608       High
cufflinks 1.533        
cufflinks 1.503        

0 Strain