Gene : Glyma.12G001500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10024:SF197 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  15
Name:  ? Glyma.12G001500 Secondary Identifier:  ? PAC:30547078
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G001500 0.5kb upstream 0.5kb upstream 4371 true Chr12: 118481-122851 Glycine max
Glyma.12G001500 0.5kb upstream 0.5kb upstream 500 false Chr12: 122352-122851 Glycine max
Glyma.12G001500 0.5kb downstream 0.5kb downstream 4371 true Chr12: 117981-122351 Glycine max
Glyma.12G001500 0.5kb downstream 0.5kb downstream 500 false Chr12: 117981-118480 Glycine max
Glyma.12G001500 1.0kb upstream 1.0kb upstream 4871 true Chr12: 118481-123351 Glycine max
Glyma.12G001500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 122352-123351 Glycine max
Glyma.12G001500 1.0kb downstream 1.0kb downstream 4871 true Chr12: 117481-122351 Glycine max
Glyma.12G001500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 117481-118480 Glycine max
Glyma.12G001500 2.0kb upstream 2.0kb upstream 5871 true Chr12: 118481-124351 Glycine max
Glyma.12G001500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 122352-124351 Glycine max
Glyma.12G001500 2.0kb downstream 2.0kb downstream 5871 true Chr12: 116481-122351 Glycine max
Glyma.12G001500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 116481-118480 Glycine max
Glyma.12G001500 5.0kb upstream 5.0kb upstream 8871 true Chr12: 118481-127351 Glycine max
Glyma.12G001500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 122352-127351 Glycine max
Glyma.12G001500 5.0kb downstream 5.0kb downstream 8871 true Chr12: 113481-122351 Glycine max
Glyma.12G001500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 113481-118480 Glycine max
Glyma.12G001500 10.0kb upstream 10.0kb upstream 13871 true Chr12: 118481-132351 Glycine max
Glyma.12G001500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 122352-132351 Glycine max
Glyma.12G001500 10.0kb downstream 10.0kb downstream 13871 true Chr12: 108481-122351 Glycine max
Glyma.12G001500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 108481-118480 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026435 5273 Angiosperm View MSA
122301302 5265 Fabidae View MSA
124063760 5270 Rosid View MSA
123752822 5271 Pentapetalae View MSA
122787154 5272 Eudicot View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.384 0.0 39.3019    
cufflinks 7.80575 0.0 20.8267    
cufflinks 46.7411 0.0 149.901 High High
cufflinks 23.3346 0.0 66.9905 High  
cufflinks 12.3735 0.0 33.5068    
cufflinks 6.48336 0.0 17.3108   Low
cufflinks 8.11619 0.0 21.6657    
cufflinks 16.877 0.0 46.7804    
cufflinks 15.1222 0.0 41.4812    
cufflinks 17.004     High  
cufflinks 18.946     High  
cufflinks 24.638     High  
cufflinks 13.247     High  
cufflinks 6.051       Low
cufflinks 43.638     High High
cufflinks 26.537     High  
cufflinks 14.272     High  
cufflinks 21.11     High  
cufflinks 11.933     High Low
cufflinks 30.288     High High
cufflinks 24.407     High  
cufflinks 26.445     High  
cufflinks 12.816     High  
cufflinks 14.919     High  
cufflinks 25.188     High  
cufflinks 20.338     High  

0 Strain