Gene : Glyma.11G247400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11842:SF11 - MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2A Genomic Order:  2474
Name:  ? Glyma.11G247400 Secondary Identifier:  ? PAC:30529560
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G247400 0.5kb upstream 0.5kb upstream 2674 true Chr11: 34020239-34022912 Glycine max
Glyma.11G247400 0.5kb upstream 0.5kb upstream 500 false Chr11: 34022413-34022912 Glycine max
Glyma.11G247400 0.5kb downstream 0.5kb downstream 2674 true Chr11: 34019739-34022412 Glycine max
Glyma.11G247400 0.5kb downstream 0.5kb downstream 500 false Chr11: 34019739-34020238 Glycine max
Glyma.11G247400 1.0kb upstream 1.0kb upstream 3174 true Chr11: 34020239-34023412 Glycine max
Glyma.11G247400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34022413-34023412 Glycine max
Glyma.11G247400 1.0kb downstream 1.0kb downstream 3174 true Chr11: 34019239-34022412 Glycine max
Glyma.11G247400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34019239-34020238 Glycine max
Glyma.11G247400 2.0kb upstream 2.0kb upstream 4174 true Chr11: 34020239-34024412 Glycine max
Glyma.11G247400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34022413-34024412 Glycine max
Glyma.11G247400 2.0kb downstream 2.0kb downstream 4174 true Chr11: 34018239-34022412 Glycine max
Glyma.11G247400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34018239-34020238 Glycine max
Glyma.11G247400 5.0kb upstream 5.0kb upstream 7174 true Chr11: 34020239-34027412 Glycine max
Glyma.11G247400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34022413-34027412 Glycine max
Glyma.11G247400 5.0kb downstream 5.0kb downstream 7174 true Chr11: 34015239-34022412 Glycine max
Glyma.11G247400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34015239-34020238 Glycine max
Glyma.11G247400 10.0kb upstream 10.0kb upstream 12174 true Chr11: 34020239-34032412 Glycine max
Glyma.11G247400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34022413-34032412 Glycine max
Glyma.11G247400 10.0kb downstream 10.0kb downstream 12174 true Chr11: 34010239-34022412 Glycine max
Glyma.11G247400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34010239-34020238 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304099 5265 Fabidae View MSA
124063049 5270 Rosid View MSA
123747176 5271 Pentapetalae View MSA
122787361 5272 Eudicot View MSA
122047880 5273 Angiosperm View MSA
121344125 5274 Embryophyte View MSA
123424567 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.26059 0.0 2.6866   Low
cufflinks 18.0029 0.0 85.9007    
cufflinks 2.28618 0.0 12.6338    
cufflinks 5.00223 0.0 34.7009    
cufflinks 10.409 0.0 50.6042    
cufflinks 8.20506 0.0 34.8853    
cufflinks 7.54718 0.0 36.3907    
cufflinks 10.3503 0.0 56.2883    
cufflinks 12.9551 0.0 64.0959    
cufflinks 1.747        
cufflinks 0.244       Low
cufflinks 0.823        
cufflinks 2.302        
cufflinks 2.574        
cufflinks 0.064       Low
cufflinks 1.964        
cufflinks 0.52        
cufflinks 0.739        
cufflinks 2.79       High
cufflinks 1.632        
cufflinks 0.408        
cufflinks 2.135        
cufflinks 2.052        
cufflinks 0.307       Low
cufflinks 1.612        
cufflinks 0.661        

0 Strain