Gene : Glyma.11G249200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13000 - NUCLEOPORIN P54 Genomic Order:  2492
Name:  ? Glyma.11G249200 Secondary Identifier:  ? PAC:30528311
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G249200 0.5kb upstream 0.5kb upstream 4203 true Chr11: 34146299-34150501 Glycine max
Glyma.11G249200 0.5kb upstream 0.5kb upstream 500 false Chr11: 34150002-34150501 Glycine max
Glyma.11G249200 0.5kb downstream 0.5kb downstream 4203 true Chr11: 34145799-34150001 Glycine max
Glyma.11G249200 0.5kb downstream 0.5kb downstream 500 false Chr11: 34145799-34146298 Glycine max
Glyma.11G249200 1.0kb upstream 1.0kb upstream 4703 true Chr11: 34146299-34151001 Glycine max
Glyma.11G249200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34150002-34151001 Glycine max
Glyma.11G249200 1.0kb downstream 1.0kb downstream 4703 true Chr11: 34145299-34150001 Glycine max
Glyma.11G249200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34145299-34146298 Glycine max
Glyma.11G249200 2.0kb upstream 2.0kb upstream 5703 true Chr11: 34146299-34152001 Glycine max
Glyma.11G249200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34150002-34152001 Glycine max
Glyma.11G249200 2.0kb downstream 2.0kb downstream 5703 true Chr11: 34144299-34150001 Glycine max
Glyma.11G249200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34144299-34146298 Glycine max
Glyma.11G249200 5.0kb upstream 5.0kb upstream 8703 true Chr11: 34146299-34155001 Glycine max
Glyma.11G249200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34150002-34155001 Glycine max
Glyma.11G249200 5.0kb downstream 5.0kb downstream 8703 true Chr11: 34141299-34150001 Glycine max
Glyma.11G249200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34141299-34146298 Glycine max
Glyma.11G249200 10.0kb upstream 10.0kb upstream 13703 true Chr11: 34146299-34160001 Glycine max
Glyma.11G249200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34150002-34160001 Glycine max
Glyma.11G249200 10.0kb downstream 10.0kb downstream 13703 true Chr11: 34136299-34150001 Glycine max
Glyma.11G249200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34136299-34146298 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315848 5265 Fabidae View MSA
124037015 5270 Rosid View MSA
123610149 5271 Pentapetalae View MSA
122795867 5272 Eudicot View MSA
122045094 5273 Angiosperm View MSA
121347023 5274 Embryophyte View MSA
123424455 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.51389 0.0 11.0579    
cufflinks 3.42517 0.0 10.8103    
cufflinks 1.70841 0.0 5.88404   Low
cufflinks 3.09966 0.0 9.90011    
cufflinks 3.83585 0.0 11.9124    
cufflinks 3.1881 0.0 10.168    
cufflinks 2.65715 0.0 8.69378    
cufflinks 2.60927 0.0 8.53913    
cufflinks 4.13921 0.0 12.7232   High
cufflinks 0.999        
cufflinks 0.548       Low
cufflinks 1.071        
cufflinks 1.665        
cufflinks 2.063       High
cufflinks 1.035        
cufflinks 1.592        
cufflinks 0.701       Low
cufflinks 1.222        
cufflinks 1.567        
cufflinks 1.673        
cufflinks 0.916        
cufflinks 1.444        
cufflinks 1.593        
cufflinks 0.902        
cufflinks 1.585        
cufflinks 0.961        

0 Strain