Gene : Glyma.11G250300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12210:SF13 - CTD SMALL PHOSPHATASE-LIKE PROTEIN 2 Genomic Order:  2503
Name:  ? Glyma.11G250300 Secondary Identifier:  ? PAC:30529811
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G250300 0.5kb upstream 0.5kb upstream 5054 true Chr11: 34201412-34206465 Glycine max
Glyma.11G250300 0.5kb upstream 0.5kb upstream 500 false Chr11: 34201412-34201911 Glycine max
Glyma.11G250300 0.5kb downstream 0.5kb downstream 5054 true Chr11: 34201912-34206965 Glycine max
Glyma.11G250300 0.5kb downstream 0.5kb downstream 500 false Chr11: 34206466-34206965 Glycine max
Glyma.11G250300 1.0kb upstream 1.0kb upstream 5554 true Chr11: 34200912-34206465 Glycine max
Glyma.11G250300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34200912-34201911 Glycine max
Glyma.11G250300 1.0kb downstream 1.0kb downstream 5554 true Chr11: 34201912-34207465 Glycine max
Glyma.11G250300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34206466-34207465 Glycine max
Glyma.11G250300 2.0kb upstream 2.0kb upstream 6554 true Chr11: 34199912-34206465 Glycine max
Glyma.11G250300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34199912-34201911 Glycine max
Glyma.11G250300 2.0kb downstream 2.0kb downstream 6554 true Chr11: 34201912-34208465 Glycine max
Glyma.11G250300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34206466-34208465 Glycine max
Glyma.11G250300 5.0kb upstream 5.0kb upstream 9554 true Chr11: 34196912-34206465 Glycine max
Glyma.11G250300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34196912-34201911 Glycine max
Glyma.11G250300 5.0kb downstream 5.0kb downstream 9554 true Chr11: 34201912-34211465 Glycine max
Glyma.11G250300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34206466-34211465 Glycine max
Glyma.11G250300 10.0kb upstream 10.0kb upstream 14554 true Chr11: 34191912-34206465 Glycine max
Glyma.11G250300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34191912-34201911 Glycine max
Glyma.11G250300 10.0kb downstream 10.0kb downstream 14554 true Chr11: 34201912-34216465 Glycine max
Glyma.11G250300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34206466-34216465 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313265 5265 Fabidae View MSA
124070783 5270 Rosid View MSA
123745069 5271 Pentapetalae View MSA
122794821 5272 Eudicot View MSA
122048249 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121310904 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3517 0.0 36.6726    
cufflinks 9.3734 0.0 33.1343    
cufflinks 9.93263 0.0 34.6018    
cufflinks 7.85213 0.0 28.6539   Low
cufflinks 12.1852 0.0 42.1808   High
cufflinks 11.8763 0.0 40.5508    
cufflinks 7.89986 0.0 28.8581   Low
cufflinks 8.54873 0.0 30.6903    
cufflinks 13.6288 0.0 46.114   High
cufflinks 1.022       Low
cufflinks 1.138       Low
cufflinks 1.609        
cufflinks 2.278       High
cufflinks 2.83       High
cufflinks 1.669        
cufflinks 1.393        
cufflinks 1.312        
cufflinks 1.521        
cufflinks 1.967        
cufflinks 1.261        
cufflinks 1.436        
cufflinks 1.623        
cufflinks 1.9        
cufflinks 1.688        
cufflinks 1.284        
cufflinks 1.264        

0 Strain