Gene : Glyma.11G250400 G. max Wm82.a2.v1
Defline:  (1 of 6) PF02301 - HORMA domain (HORMA) Genomic Order:  2504
Name:  ? Glyma.11G250400 Secondary Identifier:  ? PAC:30531079
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G250400 0.5kb upstream 0.5kb upstream 4801 true Chr11: 34208657-34213457 Glycine max
Glyma.11G250400 0.5kb upstream 0.5kb upstream 500 false Chr11: 34208657-34209156 Glycine max
Glyma.11G250400 0.5kb downstream 0.5kb downstream 4801 true Chr11: 34209157-34213957 Glycine max
Glyma.11G250400 0.5kb downstream 0.5kb downstream 500 false Chr11: 34213458-34213957 Glycine max
Glyma.11G250400 1.0kb upstream 1.0kb upstream 5301 true Chr11: 34208157-34213457 Glycine max
Glyma.11G250400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34208157-34209156 Glycine max
Glyma.11G250400 1.0kb downstream 1.0kb downstream 5301 true Chr11: 34209157-34214457 Glycine max
Glyma.11G250400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34213458-34214457 Glycine max
Glyma.11G250400 2.0kb upstream 2.0kb upstream 6301 true Chr11: 34207157-34213457 Glycine max
Glyma.11G250400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34207157-34209156 Glycine max
Glyma.11G250400 2.0kb downstream 2.0kb downstream 6301 true Chr11: 34209157-34215457 Glycine max
Glyma.11G250400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34213458-34215457 Glycine max
Glyma.11G250400 5.0kb upstream 5.0kb upstream 9301 true Chr11: 34204157-34213457 Glycine max
Glyma.11G250400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34204157-34209156 Glycine max
Glyma.11G250400 5.0kb downstream 5.0kb downstream 9301 true Chr11: 34209157-34218457 Glycine max
Glyma.11G250400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34213458-34218457 Glycine max
Glyma.11G250400 10.0kb upstream 10.0kb upstream 14301 true Chr11: 34199157-34213457 Glycine max
Glyma.11G250400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34199157-34209156 Glycine max
Glyma.11G250400 10.0kb downstream 10.0kb downstream 14301 true Chr11: 34209157-34223457 Glycine max
Glyma.11G250400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34213458-34223457 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041471 5273 Angiosperm View MSA
122316525 5265 Fabidae View MSA
124039176 5270 Rosid View MSA
123611179 5271 Pentapetalae View MSA
122645753 5272 Eudicot View MSA
123429135 5275 Viridiplantae View MSA
121347816 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0368183 0.0 0.152396 Low  
cufflinks 0.274776 0.0 1.0443    
cufflinks 0.0225733 0.0 0.0965829 Low Low
cufflinks 0.157881 0.0 0.61421 Low  
cufflinks 0.498967 0.0 1.84393    
cufflinks 0.0918763 0.0 0.364888 Low  
cufflinks 0.152957 0.0 0.596557 Low  
cufflinks 0.0598228 0.0 0.241329 Low  
cufflinks 2.37352 0.0 7.61986   High
cufflinks 0.037     Low Low
cufflinks 4.222       High
cufflinks 0.07     Low Low
cufflinks 0.572        
cufflinks 0.099        
cufflinks 1.615       High
cufflinks 0.166        
cufflinks 0.268        
cufflinks 0.126        
cufflinks 0.206        
cufflinks 0.173        
cufflinks 2.099       High
cufflinks 0.147        
cufflinks 0.205        
cufflinks 1.803       High
cufflinks 0.125        
cufflinks 2.432       High

0 Strain