Gene : Glyma.11G250500 G. max Wm82.a2.v1
Defline:  (1 of 9) PF05755 - Rubber elongation factor protein (REF) (REF) Genomic Order:  2505
Name:  ? Glyma.11G250500 Secondary Identifier:  ? PAC:30528479
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G250500 0.5kb upstream 0.5kb upstream 2830 true Chr11: 34214336-34217165 Glycine max
Glyma.11G250500 0.5kb upstream 0.5kb upstream 500 false Chr11: 34214336-34214835 Glycine max
Glyma.11G250500 0.5kb downstream 0.5kb downstream 2830 true Chr11: 34214836-34217665 Glycine max
Glyma.11G250500 0.5kb downstream 0.5kb downstream 500 false Chr11: 34217166-34217665 Glycine max
Glyma.11G250500 1.0kb upstream 1.0kb upstream 3330 true Chr11: 34213836-34217165 Glycine max
Glyma.11G250500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34213836-34214835 Glycine max
Glyma.11G250500 1.0kb downstream 1.0kb downstream 3330 true Chr11: 34214836-34218165 Glycine max
Glyma.11G250500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34217166-34218165 Glycine max
Glyma.11G250500 2.0kb upstream 2.0kb upstream 4330 true Chr11: 34212836-34217165 Glycine max
Glyma.11G250500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34212836-34214835 Glycine max
Glyma.11G250500 2.0kb downstream 2.0kb downstream 4330 true Chr11: 34214836-34219165 Glycine max
Glyma.11G250500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34217166-34219165 Glycine max
Glyma.11G250500 5.0kb upstream 5.0kb upstream 7330 true Chr11: 34209836-34217165 Glycine max
Glyma.11G250500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34209836-34214835 Glycine max
Glyma.11G250500 5.0kb downstream 5.0kb downstream 7330 true Chr11: 34214836-34222165 Glycine max
Glyma.11G250500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34217166-34222165 Glycine max
Glyma.11G250500 10.0kb upstream 10.0kb upstream 12330 true Chr11: 34204836-34217165 Glycine max
Glyma.11G250500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34204836-34214835 Glycine max
Glyma.11G250500 10.0kb downstream 10.0kb downstream 12330 true Chr11: 34214836-34227165 Glycine max
Glyma.11G250500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34217166-34227165 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311567 5265 Fabidae View MSA
124068365 5270 Rosid View MSA
123736547 5271 Pentapetalae View MSA
122769867 5272 Eudicot View MSA
122050006 5273 Angiosperm View MSA
121311681 5274 Embryophyte View MSA
123348946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.1488 0.0 89.4538 High Low
cufflinks 30.1226 0.0 80.958 High Low
cufflinks 81.5966 0.0 241.793 High High
cufflinks 61.4053 0.0 175.054 High  
cufflinks 38.202 0.0 103.935 High  
cufflinks 54.525 0.0 153.026 High  
cufflinks 41.3552 0.0 113.131 High  
cufflinks 71.1912 0.0 206.997 High High
cufflinks 55.6646 0.0 156.742 High  
cufflinks 24.425     High  
cufflinks 129.206     High High
cufflinks 31.62     High  
cufflinks 16.268     High  
cufflinks 11.602     High Low
cufflinks 128.341     High High
cufflinks 14.35     High  
cufflinks 29.405     High  
cufflinks 24.743     High  
cufflinks 17.724     High  
cufflinks 19.945     High  
cufflinks 138.1     High High
cufflinks 18.876     High  
cufflinks 11.934     High Low
cufflinks 73.288     High  
cufflinks 19.777     High  
cufflinks 93.539     High High

0 Strain