Gene : Glyma.11G250900 G. max Wm82.a2.v1
Defline:  (1 of 3) PF04359 - Protein of unknown function (DUF493) (DUF493) Genomic Order:  2509
Name:  ? Glyma.11G250900 Secondary Identifier:  ? PAC:30530292
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G250900 0.5kb upstream 0.5kb upstream 4207 true Chr11: 34254861-34259067 Glycine max
Glyma.11G250900 0.5kb upstream 0.5kb upstream 500 false Chr11: 34254861-34255360 Glycine max
Glyma.11G250900 0.5kb downstream 0.5kb downstream 4207 true Chr11: 34255361-34259567 Glycine max
Glyma.11G250900 0.5kb downstream 0.5kb downstream 500 false Chr11: 34259068-34259567 Glycine max
Glyma.11G250900 1.0kb upstream 1.0kb upstream 4707 true Chr11: 34254361-34259067 Glycine max
Glyma.11G250900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34254361-34255360 Glycine max
Glyma.11G250900 1.0kb downstream 1.0kb downstream 4707 true Chr11: 34255361-34260067 Glycine max
Glyma.11G250900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34259068-34260067 Glycine max
Glyma.11G250900 2.0kb upstream 2.0kb upstream 5707 true Chr11: 34253361-34259067 Glycine max
Glyma.11G250900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34253361-34255360 Glycine max
Glyma.11G250900 2.0kb downstream 2.0kb downstream 5707 true Chr11: 34255361-34261067 Glycine max
Glyma.11G250900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34259068-34261067 Glycine max
Glyma.11G250900 5.0kb upstream 5.0kb upstream 8707 true Chr11: 34250361-34259067 Glycine max
Glyma.11G250900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34250361-34255360 Glycine max
Glyma.11G250900 5.0kb downstream 5.0kb downstream 8707 true Chr11: 34255361-34264067 Glycine max
Glyma.11G250900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34259068-34264067 Glycine max
Glyma.11G250900 10.0kb upstream 10.0kb upstream 13707 true Chr11: 34245361-34259067 Glycine max
Glyma.11G250900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34245361-34255360 Glycine max
Glyma.11G250900 10.0kb downstream 10.0kb downstream 13707 true Chr11: 34255361-34269067 Glycine max
Glyma.11G250900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34259068-34269067 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300890 5265 Fabidae View MSA
124062101 5270 Rosid View MSA
123739527 5271 Pentapetalae View MSA
122786727 5272 Eudicot View MSA
122048054 5273 Angiosperm View MSA
121348978 5274 Embryophyte View MSA
123426420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.3592 0.0 83.7864 High High
cufflinks 15.4182 0.0 42.8007    
cufflinks 16.5664 0.0 45.5791    
cufflinks 7.62761 0.0 23.0506    
cufflinks 3.79251 0.0 12.5956   Low
cufflinks 4.18461 0.0 13.7268    
cufflinks 6.17741 0.0 19.1716    
cufflinks 8.33518 0.0 24.8265    
cufflinks 4.51383 0.0 14.646    
cufflinks 1.629        
cufflinks 0.262       Low
cufflinks 3.869        
cufflinks 0.327       Low
cufflinks 0.432        
cufflinks 0.218       Low
cufflinks 5.915       High
cufflinks 0.709        
cufflinks 3.051        
cufflinks 2.392        
cufflinks 10.255     High High
cufflinks 0.332       Low
cufflinks 8.7     High High
cufflinks 5.994       High
cufflinks 0.534        
cufflinks 7.665     High High
cufflinks 0.754        

0 Strain