Gene : Glyma.11G251500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED Genomic Order:  2515
Name:  ? Glyma.11G251500 Secondary Identifier:  ? PAC:30529389
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G251500 0.5kb upstream 0.5kb upstream 6666 true Chr11: 34283168-34289833 Glycine max
Glyma.11G251500 0.5kb upstream 0.5kb upstream 500 false Chr11: 34289334-34289833 Glycine max
Glyma.11G251500 0.5kb downstream 0.5kb downstream 6666 true Chr11: 34282668-34289333 Glycine max
Glyma.11G251500 0.5kb downstream 0.5kb downstream 500 false Chr11: 34282668-34283167 Glycine max
Glyma.11G251500 1.0kb upstream 1.0kb upstream 7166 true Chr11: 34283168-34290333 Glycine max
Glyma.11G251500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34289334-34290333 Glycine max
Glyma.11G251500 1.0kb downstream 1.0kb downstream 7166 true Chr11: 34282168-34289333 Glycine max
Glyma.11G251500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34282168-34283167 Glycine max
Glyma.11G251500 2.0kb upstream 2.0kb upstream 8166 true Chr11: 34283168-34291333 Glycine max
Glyma.11G251500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34289334-34291333 Glycine max
Glyma.11G251500 2.0kb downstream 2.0kb downstream 8166 true Chr11: 34281168-34289333 Glycine max
Glyma.11G251500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34281168-34283167 Glycine max
Glyma.11G251500 5.0kb upstream 5.0kb upstream 11166 true Chr11: 34283168-34294333 Glycine max
Glyma.11G251500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34289334-34294333 Glycine max
Glyma.11G251500 5.0kb downstream 5.0kb downstream 11166 true Chr11: 34278168-34289333 Glycine max
Glyma.11G251500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34278168-34283167 Glycine max
Glyma.11G251500 10.0kb upstream 10.0kb upstream 16166 true Chr11: 34283168-34299333 Glycine max
Glyma.11G251500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34289334-34299333 Glycine max
Glyma.11G251500 10.0kb downstream 10.0kb downstream 16166 true Chr11: 34273168-34289333 Glycine max
Glyma.11G251500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34273168-34283167 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027881 5273 Angiosperm View MSA
122305423 5265 Fabidae View MSA
124072041 5270 Rosid View MSA
123745065 5271 Pentapetalae View MSA
122789377 5272 Eudicot View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.37698 0.0 17.9118   Low
cufflinks 34.8227 0.0 208.367 High High
cufflinks 20.4595 0.0 107.116 High High
cufflinks 19.4926 0.0 104.678   High
cufflinks 6.1143 0.0 42.8523    
cufflinks 4.76553 0.0 32.4094    
cufflinks 4.25702 0.0 30.8874    
cufflinks 5.14636 0.0 30.6703    
cufflinks 3.90551 0.0 28.2096    
cufflinks 0.206        
cufflinks 0.026     Low Low
cufflinks 0.677       High
cufflinks 0.186        
cufflinks 0.172        
cufflinks 0.01     Low Low
cufflinks 0.191        
cufflinks 0.043     Low  
cufflinks 0.365        
cufflinks 0.939       High
cufflinks 0.129        
cufflinks 0.065        
cufflinks 0.197        
cufflinks 0.292        
cufflinks 0.024     Low Low
cufflinks 0.208        
cufflinks 0.079        

0 Strain