Gene : Glyma.11G241500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12736:SF14 - LANC-LIKE PROTEIN GCL1 Genomic Order:  2415
Name:  ? Glyma.11G241500 Secondary Identifier:  ? PAC:30527767
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G241500 0.5kb upstream 0.5kb upstream 5567 true Chr11: 33564982-33570548 Glycine max
Glyma.11G241500 0.5kb upstream 0.5kb upstream 500 false Chr11: 33570049-33570548 Glycine max
Glyma.11G241500 0.5kb downstream 0.5kb downstream 5567 true Chr11: 33564482-33570048 Glycine max
Glyma.11G241500 0.5kb downstream 0.5kb downstream 500 false Chr11: 33564482-33564981 Glycine max
Glyma.11G241500 1.0kb upstream 1.0kb upstream 6067 true Chr11: 33564982-33571048 Glycine max
Glyma.11G241500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33570049-33571048 Glycine max
Glyma.11G241500 1.0kb downstream 1.0kb downstream 6067 true Chr11: 33563982-33570048 Glycine max
Glyma.11G241500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33563982-33564981 Glycine max
Glyma.11G241500 2.0kb upstream 2.0kb upstream 7067 true Chr11: 33564982-33572048 Glycine max
Glyma.11G241500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33570049-33572048 Glycine max
Glyma.11G241500 2.0kb downstream 2.0kb downstream 7067 true Chr11: 33562982-33570048 Glycine max
Glyma.11G241500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33562982-33564981 Glycine max
Glyma.11G241500 5.0kb upstream 5.0kb upstream 10067 true Chr11: 33564982-33575048 Glycine max
Glyma.11G241500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33570049-33575048 Glycine max
Glyma.11G241500 5.0kb downstream 5.0kb downstream 10067 true Chr11: 33559982-33570048 Glycine max
Glyma.11G241500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33559982-33564981 Glycine max
Glyma.11G241500 10.0kb upstream 10.0kb upstream 15067 true Chr11: 33564982-33580048 Glycine max
Glyma.11G241500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33570049-33580048 Glycine max
Glyma.11G241500 10.0kb downstream 10.0kb downstream 15067 true Chr11: 33554982-33570048 Glycine max
Glyma.11G241500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33554982-33564981 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779196 5273 Angiosperm View MSA
122308648 5265 Fabidae View MSA
124064681 5270 Rosid View MSA
123736678 5271 Pentapetalae View MSA
122769873 5272 Eudicot View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.25856 0.0 12.1814   Low
cufflinks 7.7221 0.0 35.3457    
cufflinks 3.93988 0.0 21.767    
cufflinks 12.8227 0.0 57.8165    
cufflinks 3.04644 0.0 19.7616    
cufflinks 18.7983 0.0 83.7679   High
cufflinks 11.7579 0.0 45.5843    
cufflinks 7.98317 0.0 35.6542    
cufflinks 1.8862 0.0 10.7816   Low
cufflinks 2.785       High
cufflinks 0.124        
cufflinks 0.763        
cufflinks 0.282        
cufflinks 0.083        
cufflinks 0.1        
cufflinks 0.18        
cufflinks 0.755        
cufflinks 1.614       High
cufflinks 0.508        
cufflinks 0.171        
cufflinks 0.056     Low Low
cufflinks 0.175        
cufflinks 1.361       High
cufflinks 0.046     Low Low
cufflinks 0.182        
cufflinks 0.114        

0 Strain