Gene : Glyma.11G242100 G. max Wm82.a2.v1
Genomic Order:  2421 Name:  ? Glyma.11G242100
Secondary Identifier:  ? PAC:30530759
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G242100 0.5kb upstream 0.5kb upstream 1506 true Chr11: 33605537-33607042 Glycine max
Glyma.11G242100 0.5kb upstream 0.5kb upstream 500 false Chr11: 33605537-33606036 Glycine max
Glyma.11G242100 0.5kb downstream 0.5kb downstream 1506 true Chr11: 33606037-33607542 Glycine max
Glyma.11G242100 0.5kb downstream 0.5kb downstream 500 false Chr11: 33607043-33607542 Glycine max
Glyma.11G242100 1.0kb upstream 1.0kb upstream 2006 true Chr11: 33605037-33607042 Glycine max
Glyma.11G242100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33605037-33606036 Glycine max
Glyma.11G242100 1.0kb downstream 1.0kb downstream 2006 true Chr11: 33606037-33608042 Glycine max
Glyma.11G242100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33607043-33608042 Glycine max
Glyma.11G242100 2.0kb upstream 2.0kb upstream 3006 true Chr11: 33604037-33607042 Glycine max
Glyma.11G242100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33604037-33606036 Glycine max
Glyma.11G242100 2.0kb downstream 2.0kb downstream 3006 true Chr11: 33606037-33609042 Glycine max
Glyma.11G242100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33607043-33609042 Glycine max
Glyma.11G242100 5.0kb upstream 5.0kb upstream 6006 true Chr11: 33601037-33607042 Glycine max
Glyma.11G242100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33601037-33606036 Glycine max
Glyma.11G242100 5.0kb downstream 5.0kb downstream 6006 true Chr11: 33606037-33612042 Glycine max
Glyma.11G242100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33607043-33612042 Glycine max
Glyma.11G242100 10.0kb upstream 10.0kb upstream 11006 true Chr11: 33596037-33607042 Glycine max
Glyma.11G242100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33596037-33606036 Glycine max
Glyma.11G242100 10.0kb downstream 10.0kb downstream 11006 true Chr11: 33606037-33617042 Glycine max
Glyma.11G242100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33607043-33617042 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314374 5265 Fabidae View MSA
124071239 5270 Rosid View MSA
123750845 5271 Pentapetalae View MSA
122791847 5272 Eudicot View MSA
122049907 5273 Angiosperm View MSA
121311645 5274 Embryophyte View MSA
123348915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.67563 0.0 15.2725    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 46.3665 0.0 123.857 High High
cufflinks 0.173872 0.0 0.693854 Low Low
cufflinks 5.21964 0.0 16.7515    
cufflinks 37.3821 0.0 99.7476 High High
cufflinks 0.984436 0.0 3.65689    
cufflinks 0.317418 0.0 1.23938   Low
cufflinks 5.20113 0.0 16.6854    
cufflinks 2.548        
cufflinks 150.78     High High
cufflinks 27.206     High  
cufflinks 10.513     High  
cufflinks 1.273        
cufflinks 117.455     High  
cufflinks 0.229       Low
cufflinks 146.348     High High
cufflinks 0.73        
cufflinks 0.182       Low
cufflinks 0.087     Low Low
cufflinks 164.8     High High
cufflinks 0.124       Low
cufflinks 1.244        
cufflinks 170.526     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 249.642     High High

0 Strain