Gene : Glyma.11G242300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR18934:SF140 - HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN Genomic Order:  2423
Name:  ? Glyma.11G242300 Secondary Identifier:  ? PAC:30527996
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G242300 0.5kb upstream 0.5kb upstream 7313 true Chr11: 33649935-33657247 Glycine max
Glyma.11G242300 0.5kb upstream 0.5kb upstream 500 false Chr11: 33649935-33650434 Glycine max
Glyma.11G242300 0.5kb downstream 0.5kb downstream 7313 true Chr11: 33650435-33657747 Glycine max
Glyma.11G242300 0.5kb downstream 0.5kb downstream 500 false Chr11: 33657248-33657747 Glycine max
Glyma.11G242300 1.0kb upstream 1.0kb upstream 7813 true Chr11: 33649435-33657247 Glycine max
Glyma.11G242300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33649435-33650434 Glycine max
Glyma.11G242300 1.0kb downstream 1.0kb downstream 7813 true Chr11: 33650435-33658247 Glycine max
Glyma.11G242300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33657248-33658247 Glycine max
Glyma.11G242300 2.0kb upstream 2.0kb upstream 8813 true Chr11: 33648435-33657247 Glycine max
Glyma.11G242300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33648435-33650434 Glycine max
Glyma.11G242300 2.0kb downstream 2.0kb downstream 8813 true Chr11: 33650435-33659247 Glycine max
Glyma.11G242300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33657248-33659247 Glycine max
Glyma.11G242300 5.0kb upstream 5.0kb upstream 11813 true Chr11: 33645435-33657247 Glycine max
Glyma.11G242300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33645435-33650434 Glycine max
Glyma.11G242300 5.0kb downstream 5.0kb downstream 11813 true Chr11: 33650435-33662247 Glycine max
Glyma.11G242300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33657248-33662247 Glycine max
Glyma.11G242300 10.0kb upstream 10.0kb upstream 16813 true Chr11: 33640435-33657247 Glycine max
Glyma.11G242300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33640435-33650434 Glycine max
Glyma.11G242300 10.0kb downstream 10.0kb downstream 16813 true Chr11: 33650435-33667247 Glycine max
Glyma.11G242300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33657248-33667247 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303749 5265 Fabidae View MSA
124065250 5270 Rosid View MSA
123737649 5271 Pentapetalae View MSA
122792677 5272 Eudicot View MSA
122041869 5273 Angiosperm View MSA
121309896 5274 Embryophyte View MSA
123347530 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.65505 0.0 10.6364    
cufflinks 1.46325 0.0 5.1616    
cufflinks 2.67882 0.0 9.72002    
cufflinks 2.8375 0.0 10.1427    
cufflinks 1.4852 0.0 5.25746    
cufflinks 0.573832 0.0 2.70175   Low
cufflinks 2.97214 0.0 11.8493    
cufflinks 2.57766 0.0 9.42804    
cufflinks 2.05663 0.0 7.79998    
cufflinks 0.455        
cufflinks 0.082       Low
cufflinks 0.855       High
cufflinks 0.368        
cufflinks 0.209        
cufflinks 0.205        
cufflinks 0.597        
cufflinks 0.115       Low
cufflinks 0.698        
cufflinks 0.741       High
cufflinks 0.667        
cufflinks 0.146       Low
cufflinks 0.7        
cufflinks 0.486        
cufflinks 0.14       Low
cufflinks 0.554        
cufflinks 0.141       Low

0 Strain