Gene : Glyma.11G245300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12428:SF18 - ALBINO3-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  2453
Name:  ? Glyma.11G245300 Secondary Identifier:  ? PAC:30531623
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G245300 0.5kb upstream 0.5kb upstream 6704 true Chr11: 33886628-33893331 Glycine max
Glyma.11G245300 0.5kb upstream 0.5kb upstream 500 false Chr11: 33892832-33893331 Glycine max
Glyma.11G245300 0.5kb downstream 0.5kb downstream 6704 true Chr11: 33886128-33892831 Glycine max
Glyma.11G245300 0.5kb downstream 0.5kb downstream 500 false Chr11: 33886128-33886627 Glycine max
Glyma.11G245300 1.0kb upstream 1.0kb upstream 7204 true Chr11: 33886628-33893831 Glycine max
Glyma.11G245300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33892832-33893831 Glycine max
Glyma.11G245300 1.0kb downstream 1.0kb downstream 7204 true Chr11: 33885628-33892831 Glycine max
Glyma.11G245300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33885628-33886627 Glycine max
Glyma.11G245300 2.0kb upstream 2.0kb upstream 8204 true Chr11: 33886628-33894831 Glycine max
Glyma.11G245300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33892832-33894831 Glycine max
Glyma.11G245300 2.0kb downstream 2.0kb downstream 8204 true Chr11: 33884628-33892831 Glycine max
Glyma.11G245300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33884628-33886627 Glycine max
Glyma.11G245300 5.0kb upstream 5.0kb upstream 11204 true Chr11: 33886628-33897831 Glycine max
Glyma.11G245300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33892832-33897831 Glycine max
Glyma.11G245300 5.0kb downstream 5.0kb downstream 11204 true Chr11: 33881628-33892831 Glycine max
Glyma.11G245300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33881628-33886627 Glycine max
Glyma.11G245300 10.0kb upstream 10.0kb upstream 16204 true Chr11: 33886628-33902831 Glycine max
Glyma.11G245300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33892832-33902831 Glycine max
Glyma.11G245300 10.0kb downstream 10.0kb downstream 16204 true Chr11: 33876628-33892831 Glycine max
Glyma.11G245300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33876628-33886627 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304757 5265 Fabidae View MSA
124067959 5270 Rosid View MSA
123740459 5271 Pentapetalae View MSA
122792241 5272 Eudicot View MSA
122043512 5273 Angiosperm View MSA
121310140 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7641 0.0 47.5373   High
cufflinks 10.1191 0.0 27.1382    
cufflinks 16.0227 0.0 42.796   High
cufflinks 7.35342 0.0 20.0084    
cufflinks 6.76875 0.0 18.527    
cufflinks 5.76753 0.0 15.989    
cufflinks 3.95721 0.0 11.4462   Low
cufflinks 8.05171 0.0 21.7887    
cufflinks 5.56346 0.0 15.4706    
cufflinks 2.691        
cufflinks 0.933       Low
cufflinks 5.536        
cufflinks 1.79        
cufflinks 1.615        
cufflinks 0.907       Low
cufflinks 7.288     High High
cufflinks 1.701        
cufflinks 3.16        
cufflinks 3.565        
cufflinks 8.032     High High
cufflinks 0.883       Low
cufflinks 7.441     High High
cufflinks 6.209       High
cufflinks 1.192        
cufflinks 7.95     High High
cufflinks 1.267        

0 Strain