Gene : Glyma.11G235100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11058:SF11 - NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3 Genomic Order:  2351
Name:  ? Glyma.11G235100 Secondary Identifier:  ? PAC:30529052
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5083 Glycine max pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G235100 0.5kb upstream 0.5kb upstream 943 true Chr11: 33013266-33014208 Glycine max
Glyma.11G235100 0.5kb upstream 0.5kb upstream 500 false Chr11: 33013709-33014208 Glycine max
Glyma.11G235100 0.5kb downstream 0.5kb downstream 943 true Chr11: 33012766-33013708 Glycine max
Glyma.11G235100 0.5kb downstream 0.5kb downstream 500 false Chr11: 33012766-33013265 Glycine max
Glyma.11G235100 1.0kb upstream 1.0kb upstream 1443 true Chr11: 33013266-33014708 Glycine max
Glyma.11G235100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33013709-33014708 Glycine max
Glyma.11G235100 1.0kb downstream 1.0kb downstream 1443 true Chr11: 33012266-33013708 Glycine max
Glyma.11G235100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33012266-33013265 Glycine max
Glyma.11G235100 2.0kb upstream 2.0kb upstream 2443 true Chr11: 33013266-33015708 Glycine max
Glyma.11G235100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33013709-33015708 Glycine max
Glyma.11G235100 2.0kb downstream 2.0kb downstream 2443 true Chr11: 33011266-33013708 Glycine max
Glyma.11G235100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33011266-33013265 Glycine max
Glyma.11G235100 5.0kb upstream 5.0kb upstream 5443 true Chr11: 33013266-33018708 Glycine max
Glyma.11G235100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33013709-33018708 Glycine max
Glyma.11G235100 5.0kb downstream 5.0kb downstream 5443 true Chr11: 33008266-33013708 Glycine max
Glyma.11G235100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33008266-33013265 Glycine max
Glyma.11G235100 10.0kb upstream 10.0kb upstream 10443 true Chr11: 33013266-33023708 Glycine max
Glyma.11G235100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33013709-33023708 Glycine max
Glyma.11G235100 10.0kb downstream 10.0kb downstream 10443 true Chr11: 33003266-33013708 Glycine max
Glyma.11G235100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33003266-33013265 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029225 5273 Angiosperm View MSA
122246909 5265 Fabidae Singleton cluster - no MSA
123990789 5270 Rosid Singleton cluster - no MSA
123743152 5271 Pentapetalae View MSA
122792621 5272 Eudicot View MSA
121348446 5274 Embryophyte View MSA
123425081 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.121707 0.0 0.55042 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0724052 0.0 0.342567 Low Low
cufflinks 0.949775 0.0 3.75979   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.31471 0.0 1.3141    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.21        
cufflinks 0.214        
cufflinks 0.247        
cufflinks 0.151        
cufflinks 0.179        
cufflinks 0.69       High
cufflinks 0.21        
cufflinks 0.413       High
cufflinks 0.18        
cufflinks 0.411       High
cufflinks 0.079     Low Low
cufflinks 0.363        
cufflinks 0.051     Low Low
cufflinks 0.084     Low Low
cufflinks 0.084       Low
cufflinks 0.076     Low Low
cufflinks 0.184        

0 Strain