Gene : Glyma.11G237400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12460:SF4 - ENTH/VHS FAMILY PROTEIN Genomic Order:  2374
Name:  ? Glyma.11G237400 Secondary Identifier:  ? PAC:30528460
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G237400 0.5kb upstream 0.5kb upstream 5180 true Chr11: 33183295-33188474 Glycine max
Glyma.11G237400 0.5kb upstream 0.5kb upstream 500 false Chr11: 33187975-33188474 Glycine max
Glyma.11G237400 0.5kb downstream 0.5kb downstream 5180 true Chr11: 33182795-33187974 Glycine max
Glyma.11G237400 0.5kb downstream 0.5kb downstream 500 false Chr11: 33182795-33183294 Glycine max
Glyma.11G237400 1.0kb upstream 1.0kb upstream 5680 true Chr11: 33183295-33188974 Glycine max
Glyma.11G237400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33187975-33188974 Glycine max
Glyma.11G237400 1.0kb downstream 1.0kb downstream 5680 true Chr11: 33182295-33187974 Glycine max
Glyma.11G237400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33182295-33183294 Glycine max
Glyma.11G237400 2.0kb upstream 2.0kb upstream 6680 true Chr11: 33183295-33189974 Glycine max
Glyma.11G237400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33187975-33189974 Glycine max
Glyma.11G237400 2.0kb downstream 2.0kb downstream 6680 true Chr11: 33181295-33187974 Glycine max
Glyma.11G237400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33181295-33183294 Glycine max
Glyma.11G237400 5.0kb upstream 5.0kb upstream 9680 true Chr11: 33183295-33192974 Glycine max
Glyma.11G237400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33187975-33192974 Glycine max
Glyma.11G237400 5.0kb downstream 5.0kb downstream 9680 true Chr11: 33178295-33187974 Glycine max
Glyma.11G237400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33178295-33183294 Glycine max
Glyma.11G237400 10.0kb upstream 10.0kb upstream 14680 true Chr11: 33183295-33197974 Glycine max
Glyma.11G237400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33187975-33197974 Glycine max
Glyma.11G237400 10.0kb downstream 10.0kb downstream 14680 true Chr11: 33173295-33187974 Glycine max
Glyma.11G237400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33173295-33183294 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238997 5265 Fabidae Singleton cluster - no MSA
124070749 5270 Rosid View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10376 0.0 8.70986    
cufflinks 1.98037 0.0 8.36705    
cufflinks 2.81882 0.0 10.6473   High
cufflinks 2.28674 0.0 9.18284    
cufflinks 1.66325 0.0 7.44076    
cufflinks 1.16591 0.0 5.8555   Low
cufflinks 2.46058 0.0 9.72784    
cufflinks 1.81115 0.0 7.9549    
cufflinks 1.58698 0.0 7.20167    
cufflinks 1.013        
cufflinks 0.993        
cufflinks 1.069        
cufflinks 0.551       Low
cufflinks 0.499       Low
cufflinks 0.863        
cufflinks 0.761        
cufflinks 2.577       High
cufflinks 0.891        
cufflinks 0.664        
cufflinks 0.723        
cufflinks 0.758        
cufflinks 0.786        
cufflinks 1.056        
cufflinks 0.991        
cufflinks 0.664        
cufflinks 2.003       High

0 Strain