Gene : Glyma.11G237800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23315:SF66 - CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 Genomic Order:  2378
Name:  ? Glyma.11G237800 Secondary Identifier:  ? PAC:30528297
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G237800 0.5kb upstream 0.5kb upstream 10641 true Chr11: 33240512-33251152 Glycine max
Glyma.11G237800 0.5kb upstream 0.5kb upstream 500 false Chr11: 33240512-33241011 Glycine max
Glyma.11G237800 0.5kb downstream 0.5kb downstream 10641 true Chr11: 33241012-33251652 Glycine max
Glyma.11G237800 0.5kb downstream 0.5kb downstream 500 false Chr11: 33251153-33251652 Glycine max
Glyma.11G237800 1.0kb upstream 1.0kb upstream 11141 true Chr11: 33240012-33251152 Glycine max
Glyma.11G237800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33240012-33241011 Glycine max
Glyma.11G237800 1.0kb downstream 1.0kb downstream 11141 true Chr11: 33241012-33252152 Glycine max
Glyma.11G237800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33251153-33252152 Glycine max
Glyma.11G237800 2.0kb upstream 2.0kb upstream 12141 true Chr11: 33239012-33251152 Glycine max
Glyma.11G237800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33239012-33241011 Glycine max
Glyma.11G237800 2.0kb downstream 2.0kb downstream 12141 true Chr11: 33241012-33253152 Glycine max
Glyma.11G237800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33251153-33253152 Glycine max
Glyma.11G237800 5.0kb upstream 5.0kb upstream 15141 true Chr11: 33236012-33251152 Glycine max
Glyma.11G237800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33236012-33241011 Glycine max
Glyma.11G237800 5.0kb downstream 5.0kb downstream 15141 true Chr11: 33241012-33256152 Glycine max
Glyma.11G237800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33251153-33256152 Glycine max
Glyma.11G237800 10.0kb upstream 10.0kb upstream 20141 true Chr11: 33231012-33251152 Glycine max
Glyma.11G237800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33231012-33241011 Glycine max
Glyma.11G237800 10.0kb downstream 10.0kb downstream 20141 true Chr11: 33241012-33261152 Glycine max
Glyma.11G237800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33251153-33261152 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
122311347 5265 Fabidae View MSA
124063700 5270 Rosid View MSA
123740295 5271 Pentapetalae View MSA
122787406 5272 Eudicot View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4348 0.0 28.9802    
cufflinks 8.89849 0.0 24.3901    
cufflinks 4.92489 0.0 13.1554   Low
cufflinks 13.1156 0.0 37.4202    
cufflinks 19.311 0.0 58.0015   High
cufflinks 15.5944 0.0 45.4841    
cufflinks 7.52933 0.0 20.3801    
cufflinks 16.0704 0.0 47.1185    
cufflinks 12.4478 0.0 35.2788    
cufflinks 20.1     High High
cufflinks 3.027       Low
cufflinks 5.031        
cufflinks 16.31     High High
cufflinks 17.388     High High
cufflinks 6.282     High  
cufflinks 7.727     High  
cufflinks 7.114     High  
cufflinks 8.788     High  
cufflinks 9.186     High  
cufflinks 7.964     High  
cufflinks 4.787       Low
cufflinks 8.996     High  
cufflinks 10.299     High  
cufflinks 5.139        
cufflinks 6.974     High  
cufflinks 7.017     High  

0 Strain