Gene : Glyma.11G238200 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.6.1.78 - Aspartate--prephenate aminotransferase / Prephenate transaminase Genomic Order:  2382
Name:  ? Glyma.11G238200 Secondary Identifier:  ? PAC:30531002
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ASPARTATE-DEG1-PWY Glycine max pathologic  
Gmax ASPARTATESYN-PWY Glycine max pathologic  
Gmax PWY-3001 Glycine max pathologic  
Gmax PWY-3461 Glycine max pathologic  
Gmax PWY-3462 Glycine max pathologic  
Gmax PWY-3481 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  
Gmax THRESYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G238200 0.5kb upstream 0.5kb upstream 3497 true Chr11: 33265922-33269418 Glycine max
Glyma.11G238200 0.5kb upstream 0.5kb upstream 500 false Chr11: 33265922-33266421 Glycine max
Glyma.11G238200 0.5kb downstream 0.5kb downstream 3497 true Chr11: 33266422-33269918 Glycine max
Glyma.11G238200 0.5kb downstream 0.5kb downstream 500 false Chr11: 33269419-33269918 Glycine max
Glyma.11G238200 1.0kb upstream 1.0kb upstream 3997 true Chr11: 33265422-33269418 Glycine max
Glyma.11G238200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33265422-33266421 Glycine max
Glyma.11G238200 1.0kb downstream 1.0kb downstream 3997 true Chr11: 33266422-33270418 Glycine max
Glyma.11G238200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33269419-33270418 Glycine max
Glyma.11G238200 2.0kb upstream 2.0kb upstream 4997 true Chr11: 33264422-33269418 Glycine max
Glyma.11G238200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33264422-33266421 Glycine max
Glyma.11G238200 2.0kb downstream 2.0kb downstream 4997 true Chr11: 33266422-33271418 Glycine max
Glyma.11G238200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33269419-33271418 Glycine max
Glyma.11G238200 5.0kb upstream 5.0kb upstream 7997 true Chr11: 33261422-33269418 Glycine max
Glyma.11G238200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33261422-33266421 Glycine max
Glyma.11G238200 5.0kb downstream 5.0kb downstream 7997 true Chr11: 33266422-33274418 Glycine max
Glyma.11G238200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33269419-33274418 Glycine max
Glyma.11G238200 10.0kb upstream 10.0kb upstream 12997 true Chr11: 33256422-33269418 Glycine max
Glyma.11G238200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33256422-33266421 Glycine max
Glyma.11G238200 10.0kb downstream 10.0kb downstream 12997 true Chr11: 33266422-33279418 Glycine max
Glyma.11G238200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33269419-33279418 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783631 5273 Angiosperm View MSA
122298659 5265 Fabidae View MSA
124042148 5270 Rosid View MSA
123755311 5271 Pentapetalae View MSA
122776585 5272 Eudicot View MSA
121055079 5274 Embryophyte View MSA
123095026 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.177383 0.0 0.697113 Low  
cufflinks 0.242287 0.0 0.941033 Low  
cufflinks 0.128768 0.0 0.511034 Low Low
cufflinks 0.347868 0.0 1.32808    
cufflinks 13.1169 0.0 35.7969   High
cufflinks 25.9363 0.0 69.1953 High High
cufflinks 1.7774 0.0 6.17    
cufflinks 0.259691 0.0 1.00478    
cufflinks 15.2327 0.0 41.1984   High
cufflinks 0.062     Low  
cufflinks 6.706     High High
cufflinks 0.1     Low  
cufflinks 12.492     High High
cufflinks 7.339     High High
cufflinks 3.318        
cufflinks 0.083     Low  
cufflinks 2.546        
cufflinks 0.064     Low  
cufflinks 0.071     Low  
cufflinks 0.085     Low  
cufflinks 6.615     High High
cufflinks 0.067     Low  
cufflinks 0.028     Low Low
cufflinks 5.14        
cufflinks 0.064     Low  
cufflinks 11.442     High High

0 Strain