Gene : Glyma.11G239300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10788:SF19 - TREHALOSE-PHOSPHATE PHOSPHATASE E-RELATED Genomic Order:  2393
Name:  ? Glyma.11G239300 Secondary Identifier:  ? PAC:30528525
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G239300 0.5kb upstream 0.5kb upstream 3636 true Chr11: 33371914-33375549 Glycine max
Glyma.11G239300 0.5kb upstream 0.5kb upstream 500 false Chr11: 33371914-33372413 Glycine max
Glyma.11G239300 0.5kb downstream 0.5kb downstream 3636 true Chr11: 33372414-33376049 Glycine max
Glyma.11G239300 0.5kb downstream 0.5kb downstream 500 false Chr11: 33375550-33376049 Glycine max
Glyma.11G239300 1.0kb upstream 1.0kb upstream 4136 true Chr11: 33371414-33375549 Glycine max
Glyma.11G239300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33371414-33372413 Glycine max
Glyma.11G239300 1.0kb downstream 1.0kb downstream 4136 true Chr11: 33372414-33376549 Glycine max
Glyma.11G239300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33375550-33376549 Glycine max
Glyma.11G239300 2.0kb upstream 2.0kb upstream 5136 true Chr11: 33370414-33375549 Glycine max
Glyma.11G239300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33370414-33372413 Glycine max
Glyma.11G239300 2.0kb downstream 2.0kb downstream 5136 true Chr11: 33372414-33377549 Glycine max
Glyma.11G239300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33375550-33377549 Glycine max
Glyma.11G239300 5.0kb upstream 5.0kb upstream 8136 true Chr11: 33367414-33375549 Glycine max
Glyma.11G239300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33367414-33372413 Glycine max
Glyma.11G239300 5.0kb downstream 5.0kb downstream 8136 true Chr11: 33372414-33380549 Glycine max
Glyma.11G239300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33375550-33380549 Glycine max
Glyma.11G239300 10.0kb upstream 10.0kb upstream 13136 true Chr11: 33362414-33375549 Glycine max
Glyma.11G239300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33362414-33372413 Glycine max
Glyma.11G239300 10.0kb downstream 10.0kb downstream 13136 true Chr11: 33372414-33385549 Glycine max
Glyma.11G239300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33375550-33385549 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305274 5265 Fabidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.672408 0.0 3.97528    
cufflinks 7.17611 0.0 26.8152   High
cufflinks 2.55488 0.0 11.1421    
cufflinks 0.266095 0.0 1.78613   Low
cufflinks 2.3211 0.0 10.588    
cufflinks 0.37437 0.0 1.8656    
cufflinks 0.127485 0.0 0.502822 Low Low
cufflinks 3.89824 0.0 14.8586    
cufflinks 6.57508 0.0 25.3306   High
cufflinks 0.23        
cufflinks 1.765        
cufflinks 0.623        
cufflinks 0.155       Low
cufflinks 0.135       Low
cufflinks 2.578       High
cufflinks 0.308        
cufflinks 0.387        
cufflinks 1.015        
cufflinks 0.924        
cufflinks 0.234        
cufflinks 1.792       High
cufflinks 0.188       Low
cufflinks 0.301        
cufflinks 6.811     High High
cufflinks 0.375        
cufflinks 1.189        

0 Strain