Gene : Glyma.11G239600 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  2396
Name:  ? Glyma.11G239600 Secondary Identifier:  ? PAC:30530479
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G239600 0.5kb upstream 0.5kb upstream 2901 true Chr11: 33398830-33401730 Glycine max
Glyma.11G239600 0.5kb upstream 0.5kb upstream 500 false Chr11: 33398830-33399329 Glycine max
Glyma.11G239600 0.5kb downstream 0.5kb downstream 2901 true Chr11: 33399330-33402230 Glycine max
Glyma.11G239600 0.5kb downstream 0.5kb downstream 500 false Chr11: 33401731-33402230 Glycine max
Glyma.11G239600 1.0kb upstream 1.0kb upstream 3401 true Chr11: 33398330-33401730 Glycine max
Glyma.11G239600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33398330-33399329 Glycine max
Glyma.11G239600 1.0kb downstream 1.0kb downstream 3401 true Chr11: 33399330-33402730 Glycine max
Glyma.11G239600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33401731-33402730 Glycine max
Glyma.11G239600 2.0kb upstream 2.0kb upstream 4401 true Chr11: 33397330-33401730 Glycine max
Glyma.11G239600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33397330-33399329 Glycine max
Glyma.11G239600 2.0kb downstream 2.0kb downstream 4401 true Chr11: 33399330-33403730 Glycine max
Glyma.11G239600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33401731-33403730 Glycine max
Glyma.11G239600 5.0kb upstream 5.0kb upstream 7401 true Chr11: 33394330-33401730 Glycine max
Glyma.11G239600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33394330-33399329 Glycine max
Glyma.11G239600 5.0kb downstream 5.0kb downstream 7401 true Chr11: 33399330-33406730 Glycine max
Glyma.11G239600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33401731-33406730 Glycine max
Glyma.11G239600 10.0kb upstream 10.0kb upstream 12401 true Chr11: 33389330-33401730 Glycine max
Glyma.11G239600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33389330-33399329 Glycine max
Glyma.11G239600 10.0kb downstream 10.0kb downstream 12401 true Chr11: 33399330-33411730 Glycine max
Glyma.11G239600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33401731-33411730 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311047 5265 Fabidae View MSA
124069975 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.84625 0.0 11.5705    
cufflinks 2.21556 0.0 7.2099    
cufflinks 2.76098 0.0 8.73189    
cufflinks 5.11587 0.0 14.8025    
cufflinks 6.40696 0.0 18.0617    
cufflinks 9.33266 0.0 25.4872    
cufflinks 0.237926 0.0 0.910113   Low
cufflinks 7.56242 0.0 20.9496    
cufflinks 7.41784 0.0 20.6144    
cufflinks 1.009        
cufflinks 1.181        
cufflinks 1.963        
cufflinks 4.262       High
cufflinks 2.426        
cufflinks 14.188     High High
cufflinks 1.239        
cufflinks 1.06        
cufflinks 1.462        
cufflinks 3.721       High
cufflinks 0.725       Low
cufflinks 1.415        
cufflinks 1.041        
cufflinks 1.204        
cufflinks 1.347        
cufflinks 1.394        
cufflinks 1.675        

0 Strain