Gene : Glyma.11G239800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11384//PTHR11384:SF30 - ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER Genomic Order:  2398
Name:  ? Glyma.11G239800 Secondary Identifier:  ? PAC:30528621
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G239800 0.5kb upstream 0.5kb upstream 15188 true Chr11: 33424380-33439567 Glycine max
Glyma.11G239800 0.5kb upstream 0.5kb upstream 500 false Chr11: 33424380-33424879 Glycine max
Glyma.11G239800 0.5kb downstream 0.5kb downstream 15188 true Chr11: 33424880-33440067 Glycine max
Glyma.11G239800 0.5kb downstream 0.5kb downstream 500 false Chr11: 33439568-33440067 Glycine max
Glyma.11G239800 1.0kb upstream 1.0kb upstream 15688 true Chr11: 33423880-33439567 Glycine max
Glyma.11G239800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33423880-33424879 Glycine max
Glyma.11G239800 1.0kb downstream 1.0kb downstream 15688 true Chr11: 33424880-33440567 Glycine max
Glyma.11G239800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33439568-33440567 Glycine max
Glyma.11G239800 2.0kb upstream 2.0kb upstream 16688 true Chr11: 33422880-33439567 Glycine max
Glyma.11G239800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33422880-33424879 Glycine max
Glyma.11G239800 2.0kb downstream 2.0kb downstream 16688 true Chr11: 33424880-33441567 Glycine max
Glyma.11G239800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33439568-33441567 Glycine max
Glyma.11G239800 5.0kb upstream 5.0kb upstream 19688 true Chr11: 33419880-33439567 Glycine max
Glyma.11G239800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33419880-33424879 Glycine max
Glyma.11G239800 5.0kb downstream 5.0kb downstream 19688 true Chr11: 33424880-33444567 Glycine max
Glyma.11G239800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33439568-33444567 Glycine max
Glyma.11G239800 10.0kb upstream 10.0kb upstream 24688 true Chr11: 33414880-33439567 Glycine max
Glyma.11G239800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33414880-33424879 Glycine max
Glyma.11G239800 10.0kb downstream 10.0kb downstream 24688 true Chr11: 33424880-33449567 Glycine max
Glyma.11G239800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33439568-33449567 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310403 5265 Fabidae View MSA
124050169 5270 Rosid View MSA
123738081 5271 Pentapetalae View MSA
122785756 5272 Eudicot View MSA
122046456 5273 Angiosperm View MSA
121348971 5274 Embryophyte View MSA
123424415 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.08488 0.0 21.6943    
cufflinks 6.02476 0.0 18.1317    
cufflinks 10.845 0.0 33.579   High
cufflinks 7.18397 0.0 24.6802    
cufflinks 7.01807 0.0 21.2187    
cufflinks 5.39003 0.0 16.5785   Low
cufflinks 6.71296 0.0 20.8546    
cufflinks 6.99481 0.0 23.9467    
cufflinks 8.18826 0.0 28.2265    
cufflinks 1.309        
cufflinks 1.095        
cufflinks 2.463       High
cufflinks 1.568        
cufflinks 1.819       High
cufflinks 1.16        
cufflinks 1.033        
cufflinks 1.424        
cufflinks 2.53       High
cufflinks 1.305        
cufflinks 1.246        
cufflinks 0.945       Low
cufflinks 1.188        
cufflinks 0.959       Low
cufflinks 1.154        
cufflinks 1.088        
cufflinks 1.26        

0 Strain