Gene : Glyma.11G241300 G. max Wm82.a2.v1
Defline:  (1 of 42) KOG0087 - GTPase Rab11/YPT3, small G protein superfamily Genomic Order:  2413
Name:  ? Glyma.11G241300 Secondary Identifier:  ? PAC:30530825
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G241300 0.5kb upstream 0.5kb upstream 3460 true Chr11: 33551839-33555298 Glycine max
Glyma.11G241300 0.5kb upstream 0.5kb upstream 500 false Chr11: 33551839-33552338 Glycine max
Glyma.11G241300 0.5kb downstream 0.5kb downstream 3460 true Chr11: 33552339-33555798 Glycine max
Glyma.11G241300 0.5kb downstream 0.5kb downstream 500 false Chr11: 33555299-33555798 Glycine max
Glyma.11G241300 1.0kb upstream 1.0kb upstream 3960 true Chr11: 33551339-33555298 Glycine max
Glyma.11G241300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33551339-33552338 Glycine max
Glyma.11G241300 1.0kb downstream 1.0kb downstream 3960 true Chr11: 33552339-33556298 Glycine max
Glyma.11G241300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33555299-33556298 Glycine max
Glyma.11G241300 2.0kb upstream 2.0kb upstream 4960 true Chr11: 33550339-33555298 Glycine max
Glyma.11G241300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33550339-33552338 Glycine max
Glyma.11G241300 2.0kb downstream 2.0kb downstream 4960 true Chr11: 33552339-33557298 Glycine max
Glyma.11G241300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33555299-33557298 Glycine max
Glyma.11G241300 5.0kb upstream 5.0kb upstream 7960 true Chr11: 33547339-33555298 Glycine max
Glyma.11G241300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33547339-33552338 Glycine max
Glyma.11G241300 5.0kb downstream 5.0kb downstream 7960 true Chr11: 33552339-33560298 Glycine max
Glyma.11G241300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33555299-33560298 Glycine max
Glyma.11G241300 10.0kb upstream 10.0kb upstream 12960 true Chr11: 33542339-33555298 Glycine max
Glyma.11G241300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33542339-33552338 Glycine max
Glyma.11G241300 10.0kb downstream 10.0kb downstream 12960 true Chr11: 33552339-33565298 Glycine max
Glyma.11G241300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33555299-33565298 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312719 5265 Fabidae View MSA
124067588 5270 Rosid View MSA
123750991 5271 Pentapetalae View MSA
122787491 5272 Eudicot View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5632 0.0 32.4998    
cufflinks 17.3809 0.0 47.2799    
cufflinks 3.81048 0.0 12.4152   Low
cufflinks 10.7774 0.0 30.4705    
cufflinks 22.6991 0.0 60.874 High  
cufflinks 25.214 0.0 67.4402 High High
cufflinks 11.1664 0.0 31.458    
cufflinks 19.604 0.0 52.9301    
cufflinks 14.0503 0.0 38.7608    
cufflinks 8.979     High High
cufflinks 1.804       Low
cufflinks 2.607        
cufflinks 10.443     High High
cufflinks 13.504     High High
cufflinks 1.989       Low
cufflinks 6.41        
cufflinks 4.346        
cufflinks 4.589        
cufflinks 6.114        
cufflinks 4.997        
cufflinks 2.761        
cufflinks 6.21        
cufflinks 8.255     High  
cufflinks 1.843       Low
cufflinks 4.866        
cufflinks 3.716        

0 Strain