Gene : Glyma.12G019600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12982 - PHOSPHATIDYLINOSITOL GLYCAN, CLASS C Genomic Order:  196
Name:  ? Glyma.12G019600 Secondary Identifier:  ? PAC:30548958
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G019600 0.5kb upstream 0.5kb upstream 3165 true Chr12: 1377246-1380410 Glycine max
Glyma.12G019600 0.5kb upstream 0.5kb upstream 500 false Chr12: 1377246-1377745 Glycine max
Glyma.12G019600 0.5kb downstream 0.5kb downstream 3165 true Chr12: 1377746-1380910 Glycine max
Glyma.12G019600 0.5kb downstream 0.5kb downstream 500 false Chr12: 1380411-1380910 Glycine max
Glyma.12G019600 1.0kb upstream 1.0kb upstream 3665 true Chr12: 1376746-1380410 Glycine max
Glyma.12G019600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1376746-1377745 Glycine max
Glyma.12G019600 1.0kb downstream 1.0kb downstream 3665 true Chr12: 1377746-1381410 Glycine max
Glyma.12G019600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1380411-1381410 Glycine max
Glyma.12G019600 2.0kb upstream 2.0kb upstream 4665 true Chr12: 1375746-1380410 Glycine max
Glyma.12G019600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1375746-1377745 Glycine max
Glyma.12G019600 2.0kb downstream 2.0kb downstream 4665 true Chr12: 1377746-1382410 Glycine max
Glyma.12G019600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1380411-1382410 Glycine max
Glyma.12G019600 5.0kb upstream 5.0kb upstream 7665 true Chr12: 1372746-1380410 Glycine max
Glyma.12G019600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1372746-1377745 Glycine max
Glyma.12G019600 5.0kb downstream 5.0kb downstream 7665 true Chr12: 1377746-1385410 Glycine max
Glyma.12G019600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1380411-1385410 Glycine max
Glyma.12G019600 10.0kb upstream 10.0kb upstream 12665 true Chr12: 1367746-1380410 Glycine max
Glyma.12G019600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1367746-1377745 Glycine max
Glyma.12G019600 10.0kb downstream 10.0kb downstream 12665 true Chr12: 1377746-1390410 Glycine max
Glyma.12G019600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1380411-1390410 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041331 5273 Angiosperm View MSA
122310540 5265 Fabidae View MSA
124064449 5270 Rosid View MSA
123740106 5271 Pentapetalae View MSA
122792620 5272 Eudicot View MSA
121345489 5274 Embryophyte View MSA
123426053 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.41666 0.0 8.03875    
cufflinks 2.16904 0.0 7.2917    
cufflinks 2.98976 0.0 9.59341    
cufflinks 1.65811 0.0 5.7407   Low
cufflinks 2.07538 0.0 7.03784    
cufflinks 3.91877 0.0 12.1476   High
cufflinks 1.68177 0.0 5.83344   Low
cufflinks 2.7861 0.0 9.07494    
cufflinks 2.45103 0.0 8.11277    
cufflinks 1.322        
cufflinks 2.704       High
cufflinks 1.436        
cufflinks 1.102       Low
cufflinks 1.228       Low
cufflinks 1.408        
cufflinks 1.178       Low
cufflinks 2.637       High
cufflinks 1.39        
cufflinks 1.49        
cufflinks 1.642        
cufflinks 1.835        
cufflinks 1.784        
cufflinks 1.746        
cufflinks 2.898       High
cufflinks 1.404        
cufflinks 2.105        

0 Strain