Gene : Glyma.12G020700 G. max Wm82.a2.v1
Defline:  (1 of 3) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  207
Name:  ? Glyma.12G020700 Secondary Identifier:  ? PAC:30548466
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G020700 0.5kb upstream 0.5kb upstream 17663 true Chr12: 1470114-1487776 Glycine max
Glyma.12G020700 0.5kb upstream 0.5kb upstream 500 false Chr12: 1487277-1487776 Glycine max
Glyma.12G020700 0.5kb downstream 0.5kb downstream 17663 true Chr12: 1469614-1487276 Glycine max
Glyma.12G020700 0.5kb downstream 0.5kb downstream 500 false Chr12: 1469614-1470113 Glycine max
Glyma.12G020700 1.0kb upstream 1.0kb upstream 18163 true Chr12: 1470114-1488276 Glycine max
Glyma.12G020700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1487277-1488276 Glycine max
Glyma.12G020700 1.0kb downstream 1.0kb downstream 18163 true Chr12: 1469114-1487276 Glycine max
Glyma.12G020700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1469114-1470113 Glycine max
Glyma.12G020700 2.0kb upstream 2.0kb upstream 19163 true Chr12: 1470114-1489276 Glycine max
Glyma.12G020700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1487277-1489276 Glycine max
Glyma.12G020700 2.0kb downstream 2.0kb downstream 19163 true Chr12: 1468114-1487276 Glycine max
Glyma.12G020700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1468114-1470113 Glycine max
Glyma.12G020700 5.0kb upstream 5.0kb upstream 22163 true Chr12: 1470114-1492276 Glycine max
Glyma.12G020700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1487277-1492276 Glycine max
Glyma.12G020700 5.0kb downstream 5.0kb downstream 22163 true Chr12: 1465114-1487276 Glycine max
Glyma.12G020700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1465114-1470113 Glycine max
Glyma.12G020700 10.0kb upstream 10.0kb upstream 27163 true Chr12: 1470114-1497276 Glycine max
Glyma.12G020700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1487277-1497276 Glycine max
Glyma.12G020700 10.0kb downstream 10.0kb downstream 27163 true Chr12: 1460114-1487276 Glycine max
Glyma.12G020700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1460114-1470113 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041086 5273 Angiosperm View MSA
122307524 5265 Fabidae View MSA
124063415 5270 Rosid View MSA
123737064 5271 Pentapetalae View MSA
122787980 5272 Eudicot View MSA
121346625 5274 Embryophyte View MSA
123428554 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.7758 0.0 15.4893    
cufflinks 6.37967 0.0 17.0606    
cufflinks 4.69595 0.0 12.6904   Low
cufflinks 7.55279 0.0 20.152    
cufflinks 12.4101 0.0 33.4533   High
cufflinks 4.79337 0.0 12.9495   Low
cufflinks 9.84196 0.0 26.3135   High
cufflinks 6.53937 0.0 17.4772    
cufflinks 5.53675 0.0 14.8653    
cufflinks 2.276        
cufflinks 0.529       Low
cufflinks 2.039        
cufflinks 3.645       High
cufflinks 5.372       High
cufflinks 0.624       Low
cufflinks 2.406        
cufflinks 1.372        
cufflinks 2.688        
cufflinks 2.778        
cufflinks 2.052        
cufflinks 1.105        
cufflinks 2.089        
cufflinks 2.52        
cufflinks 0.726       Low
cufflinks 2.337        
cufflinks 1.375        

0 Strain