Gene : Glyma.12G021800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24067//PTHR24067:SF121 - UBIQUITIN-CONJUGATING ENZYME E2 Genomic Order:  218
Name:  ? Glyma.12G021800 Secondary Identifier:  ? PAC:30548549
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G021800 0.5kb upstream 0.5kb upstream 2369 true Chr12: 1572976-1575344 Glycine max
Glyma.12G021800 0.5kb upstream 0.5kb upstream 500 false Chr12: 1574845-1575344 Glycine max
Glyma.12G021800 0.5kb downstream 0.5kb downstream 2369 true Chr12: 1572476-1574844 Glycine max
Glyma.12G021800 0.5kb downstream 0.5kb downstream 500 false Chr12: 1572476-1572975 Glycine max
Glyma.12G021800 1.0kb upstream 1.0kb upstream 2869 true Chr12: 1572976-1575844 Glycine max
Glyma.12G021800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1574845-1575844 Glycine max
Glyma.12G021800 1.0kb downstream 1.0kb downstream 2869 true Chr12: 1571976-1574844 Glycine max
Glyma.12G021800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1571976-1572975 Glycine max
Glyma.12G021800 2.0kb upstream 2.0kb upstream 3869 true Chr12: 1572976-1576844 Glycine max
Glyma.12G021800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1574845-1576844 Glycine max
Glyma.12G021800 2.0kb downstream 2.0kb downstream 3869 true Chr12: 1570976-1574844 Glycine max
Glyma.12G021800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1570976-1572975 Glycine max
Glyma.12G021800 5.0kb upstream 5.0kb upstream 6869 true Chr12: 1572976-1579844 Glycine max
Glyma.12G021800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1574845-1579844 Glycine max
Glyma.12G021800 5.0kb downstream 5.0kb downstream 6869 true Chr12: 1567976-1574844 Glycine max
Glyma.12G021800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1567976-1572975 Glycine max
Glyma.12G021800 10.0kb upstream 10.0kb upstream 11869 true Chr12: 1572976-1584844 Glycine max
Glyma.12G021800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1574845-1584844 Glycine max
Glyma.12G021800 10.0kb downstream 10.0kb downstream 11869 true Chr12: 1562976-1574844 Glycine max
Glyma.12G021800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1562976-1572975 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310940 5265 Fabidae View MSA
124064944 5270 Rosid View MSA
123741729 5271 Pentapetalae View MSA
122792532 5272 Eudicot View MSA
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.688181 0.0 3.36036   Low
cufflinks 52.8117 0.0 209.612 High  
cufflinks 4.0761 0.0 13.7568    
cufflinks 14.7607 0.0 59.0655    
cufflinks 30.1891 0.0 114.428 High  
cufflinks 28.7364 0.0 108.444 High  
cufflinks 25.2381 0.0 97.4501 High  
cufflinks 27.6944 0.0 106.773 High  
cufflinks 30.5681 0.0 114.164 High  
cufflinks 8.692     High  
cufflinks 0.528       Low
cufflinks 4.937        
cufflinks 15.77     High  
cufflinks 19.188     High High
cufflinks 0.139       Low
cufflinks 10.801     High  
cufflinks 2.441        
cufflinks 4.491        
cufflinks 17.027     High  
cufflinks 9.701     High  
cufflinks 0.82       Low
cufflinks 11.07     High  
cufflinks 15.245     High  
cufflinks 0.336       Low
cufflinks 8.797     High  
cufflinks 1.743        

0 Strain