Gene : Glyma.12G023400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Genomic Order:  234
Name:  ? Glyma.12G023400 Secondary Identifier:  ? PAC:30547060
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G023400 0.5kb upstream 0.5kb upstream 4029 true Chr12: 1718514-1722542 Glycine max
Glyma.12G023400 0.5kb upstream 0.5kb upstream 500 false Chr12: 1718514-1719013 Glycine max
Glyma.12G023400 0.5kb downstream 0.5kb downstream 4029 true Chr12: 1719014-1723042 Glycine max
Glyma.12G023400 0.5kb downstream 0.5kb downstream 500 false Chr12: 1722543-1723042 Glycine max
Glyma.12G023400 1.0kb upstream 1.0kb upstream 4529 true Chr12: 1718014-1722542 Glycine max
Glyma.12G023400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1718014-1719013 Glycine max
Glyma.12G023400 1.0kb downstream 1.0kb downstream 4529 true Chr12: 1719014-1723542 Glycine max
Glyma.12G023400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1722543-1723542 Glycine max
Glyma.12G023400 2.0kb upstream 2.0kb upstream 5529 true Chr12: 1717014-1722542 Glycine max
Glyma.12G023400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1717014-1719013 Glycine max
Glyma.12G023400 2.0kb downstream 2.0kb downstream 5529 true Chr12: 1719014-1724542 Glycine max
Glyma.12G023400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1722543-1724542 Glycine max
Glyma.12G023400 5.0kb upstream 5.0kb upstream 8529 true Chr12: 1714014-1722542 Glycine max
Glyma.12G023400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1714014-1719013 Glycine max
Glyma.12G023400 5.0kb downstream 5.0kb downstream 8529 true Chr12: 1719014-1727542 Glycine max
Glyma.12G023400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1722543-1727542 Glycine max
Glyma.12G023400 10.0kb upstream 10.0kb upstream 13529 true Chr12: 1709014-1722542 Glycine max
Glyma.12G023400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1709014-1719013 Glycine max
Glyma.12G023400 10.0kb downstream 10.0kb downstream 13529 true Chr12: 1719014-1732542 Glycine max
Glyma.12G023400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1722543-1732542 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300301 5265 Fabidae View MSA
124066170 5270 Rosid View MSA
123737704 5271 Pentapetalae View MSA
122792292 5272 Eudicot View MSA
122042177 5273 Angiosperm View MSA
121349126 5274 Embryophyte View MSA
123381182 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.29282 0.0 6.44893   Low
cufflinks 11.0508 0.0 37.8143   High
cufflinks 3.40577 0.0 12.2928    
cufflinks 11.7357 0.0 40.0475   High
cufflinks 3.83315 0.0 13.3593    
cufflinks 1.53647 0.0 7.20828   Low
cufflinks 5.96938 0.0 21.8455    
cufflinks 7.75369 0.0 27.2731    
cufflinks 2.81965 0.0 10.7508    
cufflinks 1.658        
cufflinks 0.163       Low
cufflinks 1.647        
cufflinks 0.945        
cufflinks 0.937        
cufflinks 0.253       Low
cufflinks 2.106        
cufflinks 0.242       Low
cufflinks 2.148        
cufflinks 4.998       High
cufflinks 1.953        
cufflinks 0.235       Low
cufflinks 2.18        
cufflinks 2.295        
cufflinks 0.176       Low
cufflinks 2.097        
cufflinks 0.23       Low

0 Strain