Gene : Glyma.12G014300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10108:SF708 - TOCOPHEROL O-METHYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  143
Name:  ? Glyma.12G014300 Secondary Identifier:  ? PAC:30545671
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1422 Glycine max pathologic  
Gmax PWY-7436 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G014300 0.5kb upstream 0.5kb upstream 4404 true Chr12: 1033151-1037554 Glycine max
Glyma.12G014300 0.5kb upstream 0.5kb upstream 500 false Chr12: 1037055-1037554 Glycine max
Glyma.12G014300 0.5kb downstream 0.5kb downstream 4404 true Chr12: 1032651-1037054 Glycine max
Glyma.12G014300 0.5kb downstream 0.5kb downstream 500 false Chr12: 1032651-1033150 Glycine max
Glyma.12G014300 1.0kb upstream 1.0kb upstream 4904 true Chr12: 1033151-1038054 Glycine max
Glyma.12G014300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1037055-1038054 Glycine max
Glyma.12G014300 1.0kb downstream 1.0kb downstream 4904 true Chr12: 1032151-1037054 Glycine max
Glyma.12G014300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1032151-1033150 Glycine max
Glyma.12G014300 2.0kb upstream 2.0kb upstream 5904 true Chr12: 1033151-1039054 Glycine max
Glyma.12G014300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1037055-1039054 Glycine max
Glyma.12G014300 2.0kb downstream 2.0kb downstream 5904 true Chr12: 1031151-1037054 Glycine max
Glyma.12G014300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1031151-1033150 Glycine max
Glyma.12G014300 5.0kb upstream 5.0kb upstream 8904 true Chr12: 1033151-1042054 Glycine max
Glyma.12G014300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1037055-1042054 Glycine max
Glyma.12G014300 5.0kb downstream 5.0kb downstream 8904 true Chr12: 1028151-1037054 Glycine max
Glyma.12G014300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1028151-1033150 Glycine max
Glyma.12G014300 10.0kb upstream 10.0kb upstream 13904 true Chr12: 1033151-1047054 Glycine max
Glyma.12G014300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1037055-1047054 Glycine max
Glyma.12G014300 10.0kb downstream 10.0kb downstream 13904 true Chr12: 1023151-1037054 Glycine max
Glyma.12G014300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1023151-1033150 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299089 5265 Fabidae View MSA
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 122.068 0.0 380.738 High High
cufflinks 13.9722 0.0 37.6945    
cufflinks 21.9 0.0 58.4264 High  
cufflinks 10.402 0.0 28.5648    
cufflinks 6.91783 0.0 19.7429    
cufflinks 1.60744 0.0 5.55681   Low
cufflinks 5.24792 0.0 15.5285    
cufflinks 22.2712 0.0 59.4169 High  
cufflinks 10.3735 0.0 28.4779    
cufflinks 5.347        
cufflinks 0.078       Low
cufflinks 10.704     High  
cufflinks 0.388        
cufflinks 0.551        
cufflinks 1.581        
cufflinks 8.796     High  
cufflinks 0.508        
cufflinks 11.661     High High
cufflinks 6.196        
cufflinks 9.853     High  
cufflinks 0.223       Low
cufflinks 9.724     High  
cufflinks 8.665     High  
cufflinks 0.172       Low
cufflinks 9.954     High  
cufflinks 0.199       Low

0 Strain