Gene : Glyma.12G016500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10584//PTHR10584:SF162 - SUGAR KINASE Genomic Order:  165
Name:  ? Glyma.12G016500 Secondary Identifier:  ? PAC:30545885
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G016500 0.5kb upstream 0.5kb upstream 3731 true Chr12: 1169676-1173406 Glycine max
Glyma.12G016500 0.5kb upstream 0.5kb upstream 500 false Chr12: 1172907-1173406 Glycine max
Glyma.12G016500 0.5kb downstream 0.5kb downstream 3731 true Chr12: 1169176-1172906 Glycine max
Glyma.12G016500 0.5kb downstream 0.5kb downstream 500 false Chr12: 1169176-1169675 Glycine max
Glyma.12G016500 1.0kb upstream 1.0kb upstream 4231 true Chr12: 1169676-1173906 Glycine max
Glyma.12G016500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1172907-1173906 Glycine max
Glyma.12G016500 1.0kb downstream 1.0kb downstream 4231 true Chr12: 1168676-1172906 Glycine max
Glyma.12G016500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1168676-1169675 Glycine max
Glyma.12G016500 2.0kb upstream 2.0kb upstream 5231 true Chr12: 1169676-1174906 Glycine max
Glyma.12G016500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1172907-1174906 Glycine max
Glyma.12G016500 2.0kb downstream 2.0kb downstream 5231 true Chr12: 1167676-1172906 Glycine max
Glyma.12G016500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1167676-1169675 Glycine max
Glyma.12G016500 5.0kb upstream 5.0kb upstream 8231 true Chr12: 1169676-1177906 Glycine max
Glyma.12G016500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1172907-1177906 Glycine max
Glyma.12G016500 5.0kb downstream 5.0kb downstream 8231 true Chr12: 1164676-1172906 Glycine max
Glyma.12G016500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1164676-1169675 Glycine max
Glyma.12G016500 10.0kb upstream 10.0kb upstream 13231 true Chr12: 1169676-1182906 Glycine max
Glyma.12G016500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1172907-1182906 Glycine max
Glyma.12G016500 10.0kb downstream 10.0kb downstream 13231 true Chr12: 1159676-1172906 Glycine max
Glyma.12G016500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1159676-1169675 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301925 5265 Fabidae View MSA
124063069 5270 Rosid View MSA
123736947 5271 Pentapetalae View MSA
122789457 5272 Eudicot View MSA
122045290 5273 Angiosperm View MSA
121350301 5274 Embryophyte View MSA
123427839 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.2659 0.0 131.831 High High
cufflinks 13.1809 0.0 35.4143    
cufflinks 16.4664 0.0 43.968    
cufflinks 4.75706 0.0 13.9742    
cufflinks 6.19686 0.0 17.6437    
cufflinks 7.11195 0.0 19.9275    
cufflinks 4.9858 0.0 14.5861    
cufflinks 9.0057 0.0 24.7096    
cufflinks 3.62505 0.0 11.0478   Low
cufflinks 3.291        
cufflinks 4.214        
cufflinks 6.117        
cufflinks 2.343        
cufflinks 1.599       Low
cufflinks 2.499        
cufflinks 26.228     High High
cufflinks 1.672       Low
cufflinks 3.242        
cufflinks 6.604        
cufflinks 30.065     High High
cufflinks 4.435        
cufflinks 27.319     High High
cufflinks 21.8     High High
cufflinks 4.843        
cufflinks 28.068     High High
cufflinks 3.092        

0 Strain