Gene : Glyma.12G017700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23075:SF0 - ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  177
Name:  ? Glyma.12G017700 Secondary Identifier:  ? PAC:30547695
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G017700 0.5kb upstream 0.5kb upstream 4712 true Chr12: 1239964-1244675 Glycine max
Glyma.12G017700 0.5kb upstream 0.5kb upstream 500 false Chr12: 1239964-1240463 Glycine max
Glyma.12G017700 0.5kb downstream 0.5kb downstream 4712 true Chr12: 1240464-1245175 Glycine max
Glyma.12G017700 0.5kb downstream 0.5kb downstream 500 false Chr12: 1244676-1245175 Glycine max
Glyma.12G017700 1.0kb upstream 1.0kb upstream 5212 true Chr12: 1239464-1244675 Glycine max
Glyma.12G017700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1239464-1240463 Glycine max
Glyma.12G017700 1.0kb downstream 1.0kb downstream 5212 true Chr12: 1240464-1245675 Glycine max
Glyma.12G017700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1244676-1245675 Glycine max
Glyma.12G017700 2.0kb upstream 2.0kb upstream 6212 true Chr12: 1238464-1244675 Glycine max
Glyma.12G017700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1238464-1240463 Glycine max
Glyma.12G017700 2.0kb downstream 2.0kb downstream 6212 true Chr12: 1240464-1246675 Glycine max
Glyma.12G017700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1244676-1246675 Glycine max
Glyma.12G017700 5.0kb upstream 5.0kb upstream 9212 true Chr12: 1235464-1244675 Glycine max
Glyma.12G017700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1235464-1240463 Glycine max
Glyma.12G017700 5.0kb downstream 5.0kb downstream 9212 true Chr12: 1240464-1249675 Glycine max
Glyma.12G017700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1244676-1249675 Glycine max
Glyma.12G017700 10.0kb upstream 10.0kb upstream 14212 true Chr12: 1230464-1244675 Glycine max
Glyma.12G017700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1230464-1240463 Glycine max
Glyma.12G017700 10.0kb downstream 10.0kb downstream 14212 true Chr12: 1240464-1254675 Glycine max
Glyma.12G017700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1244676-1254675 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306849 5265 Fabidae View MSA
124062064 5270 Rosid View MSA
123743451 5271 Pentapetalae View MSA
122787141 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.71982 0.0 18.2355   High
cufflinks 4.05308 0.0 11.4777    
cufflinks 1.29565 0.0 4.26467   Low
cufflinks 1.97574 0.0 6.13088   Low
cufflinks 7.36543 0.0 19.8878   High
cufflinks 3.66958 0.0 10.5106    
cufflinks 3.07188 0.0 9.00562    
cufflinks 3.5045 0.0 10.0756    
cufflinks 3.96296 0.0 11.2502    
cufflinks 1.575        
cufflinks 0.59       Low
cufflinks 2.089        
cufflinks 6.66       High
cufflinks 9.913     High High
cufflinks 0.588       Low
cufflinks 1.531        
cufflinks 1.386        
cufflinks 1.765        
cufflinks 3.135        
cufflinks 0.867        
cufflinks 1.143        
cufflinks 1.049        
cufflinks 2.346        
cufflinks 0.627       Low
cufflinks 1.368        
cufflinks 1.822        

0 Strain