Gene : Glyma.12G017800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13156 - NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT Genomic Order:  178
Name:  ? Glyma.12G017800 Secondary Identifier:  ? PAC:30548711
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G017800 0.5kb upstream 0.5kb upstream 3424 true Chr12: 1245635-1249058 Glycine max
Glyma.12G017800 0.5kb upstream 0.5kb upstream 500 false Chr12: 1248559-1249058 Glycine max
Glyma.12G017800 0.5kb downstream 0.5kb downstream 3424 true Chr12: 1245135-1248558 Glycine max
Glyma.12G017800 0.5kb downstream 0.5kb downstream 500 false Chr12: 1245135-1245634 Glycine max
Glyma.12G017800 1.0kb upstream 1.0kb upstream 3924 true Chr12: 1245635-1249558 Glycine max
Glyma.12G017800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1248559-1249558 Glycine max
Glyma.12G017800 1.0kb downstream 1.0kb downstream 3924 true Chr12: 1244635-1248558 Glycine max
Glyma.12G017800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1244635-1245634 Glycine max
Glyma.12G017800 2.0kb upstream 2.0kb upstream 4924 true Chr12: 1245635-1250558 Glycine max
Glyma.12G017800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1248559-1250558 Glycine max
Glyma.12G017800 2.0kb downstream 2.0kb downstream 4924 true Chr12: 1243635-1248558 Glycine max
Glyma.12G017800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1243635-1245634 Glycine max
Glyma.12G017800 5.0kb upstream 5.0kb upstream 7924 true Chr12: 1245635-1253558 Glycine max
Glyma.12G017800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1248559-1253558 Glycine max
Glyma.12G017800 5.0kb downstream 5.0kb downstream 7924 true Chr12: 1240635-1248558 Glycine max
Glyma.12G017800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1240635-1245634 Glycine max
Glyma.12G017800 10.0kb upstream 10.0kb upstream 12924 true Chr12: 1245635-1258558 Glycine max
Glyma.12G017800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1248559-1258558 Glycine max
Glyma.12G017800 10.0kb downstream 10.0kb downstream 12924 true Chr12: 1235635-1248558 Glycine max
Glyma.12G017800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1235635-1245634 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301945 5265 Fabidae View MSA
124068535 5270 Rosid View MSA
123737365 5271 Pentapetalae View MSA
122786267 5272 Eudicot View MSA
122043050 5273 Angiosperm View MSA
121344521 5274 Embryophyte View MSA
123424035 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.1904 0.0 67.6664 High Low
cufflinks 41.5926 0.0 111.067 High  
cufflinks 29.3184 0.0 78.3697 High  
cufflinks 32.0288 0.0 85.5142 High  
cufflinks 47.3339 0.0 126.781 High  
cufflinks 87.8059 0.0 244.598 High High
cufflinks 48.2986 0.0 129.39 High  
cufflinks 40.3113 0.0 107.626 High  
cufflinks 48.0414 0.0 128.753 High  
cufflinks 14.043     High High
cufflinks 3.358       Low
cufflinks 7.513     High  
cufflinks 16.982     High High
cufflinks 16.777     High High
cufflinks 3.195       Low
cufflinks 8.356     High  
cufflinks 4.71        
cufflinks 11.72     High  
cufflinks 9.772     High  
cufflinks 7.885     High  
cufflinks 5.219        
cufflinks 8.128     High  
cufflinks 8.661     High  
cufflinks 4.668        
cufflinks 9.406     High  
cufflinks 5.847        

0 Strain