Gene : Glyma.12G018900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33621:SF2 - T17B22.18 PROTEIN Genomic Order:  189
Name:  ? Glyma.12G018900 Secondary Identifier:  ? PAC:30546789
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G018900 0.5kb upstream 0.5kb upstream 4325 true Chr12: 1327640-1331964 Glycine max
Glyma.12G018900 0.5kb upstream 0.5kb upstream 500 false Chr12: 1331465-1331964 Glycine max
Glyma.12G018900 0.5kb downstream 0.5kb downstream 4325 true Chr12: 1327140-1331464 Glycine max
Glyma.12G018900 0.5kb downstream 0.5kb downstream 500 false Chr12: 1327140-1327639 Glycine max
Glyma.12G018900 1.0kb upstream 1.0kb upstream 4825 true Chr12: 1327640-1332464 Glycine max
Glyma.12G018900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1331465-1332464 Glycine max
Glyma.12G018900 1.0kb downstream 1.0kb downstream 4825 true Chr12: 1326640-1331464 Glycine max
Glyma.12G018900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1326640-1327639 Glycine max
Glyma.12G018900 2.0kb upstream 2.0kb upstream 5825 true Chr12: 1327640-1333464 Glycine max
Glyma.12G018900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1331465-1333464 Glycine max
Glyma.12G018900 2.0kb downstream 2.0kb downstream 5825 true Chr12: 1325640-1331464 Glycine max
Glyma.12G018900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1325640-1327639 Glycine max
Glyma.12G018900 5.0kb upstream 5.0kb upstream 8825 true Chr12: 1327640-1336464 Glycine max
Glyma.12G018900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1331465-1336464 Glycine max
Glyma.12G018900 5.0kb downstream 5.0kb downstream 8825 true Chr12: 1322640-1331464 Glycine max
Glyma.12G018900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1322640-1327639 Glycine max
Glyma.12G018900 10.0kb upstream 10.0kb upstream 13825 true Chr12: 1327640-1341464 Glycine max
Glyma.12G018900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1331465-1341464 Glycine max
Glyma.12G018900 10.0kb downstream 10.0kb downstream 13825 true Chr12: 1317640-1331464 Glycine max
Glyma.12G018900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1317640-1327639 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302975 5265 Fabidae View MSA
124068263 5270 Rosid View MSA
123748135 5271 Pentapetalae View MSA
122789314 5272 Eudicot View MSA
122049048 5273 Angiosperm View MSA
121351117 5274 Embryophyte View MSA
123382012 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0341351 0.0 0.137584 Low Low
cufflinks 6.02244 0.0 18.6078    
cufflinks 0.366064 0.0 1.62169    
cufflinks 1.06075 0.0 4.78987    
cufflinks 10.9756 0.0 32.8852   High
cufflinks 6.08756 0.0 18.9428    
cufflinks 0.863701 0.0 3.15714    
cufflinks 3.35596 0.0 10.8458    
cufflinks 6.2525 0.0 21.6959    
cufflinks 2.028        
cufflinks 0.194        
cufflinks 0.912        
cufflinks 10.017     High High
cufflinks 13.14     High High
cufflinks 0.01     Low Low
cufflinks 2.35        
cufflinks 0.512        
cufflinks 0.653        
cufflinks 4.099        
cufflinks 1.914        
cufflinks 0.253        
cufflinks 2.125        
cufflinks 2.727        
cufflinks 0.144       Low
cufflinks 1.507        
cufflinks 0.545        

0 Strain