Gene : Glyma.12G009300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10108//PTHR10108:SF908 - METHYLTRANSFERASE Genomic Order:  93
Name:  ? Glyma.12G009300 Secondary Identifier:  ? PAC:30546939
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G009300 0.5kb upstream 0.5kb upstream 4599 true Chr12: 675378-679976 Glycine max
Glyma.12G009300 0.5kb upstream 0.5kb upstream 500 false Chr12: 675378-675877 Glycine max
Glyma.12G009300 0.5kb downstream 0.5kb downstream 4599 true Chr12: 675878-680476 Glycine max
Glyma.12G009300 0.5kb downstream 0.5kb downstream 500 false Chr12: 679977-680476 Glycine max
Glyma.12G009300 1.0kb upstream 1.0kb upstream 5099 true Chr12: 674878-679976 Glycine max
Glyma.12G009300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 674878-675877 Glycine max
Glyma.12G009300 1.0kb downstream 1.0kb downstream 5099 true Chr12: 675878-680976 Glycine max
Glyma.12G009300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 679977-680976 Glycine max
Glyma.12G009300 2.0kb upstream 2.0kb upstream 6099 true Chr12: 673878-679976 Glycine max
Glyma.12G009300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 673878-675877 Glycine max
Glyma.12G009300 2.0kb downstream 2.0kb downstream 6099 true Chr12: 675878-681976 Glycine max
Glyma.12G009300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 679977-681976 Glycine max
Glyma.12G009300 5.0kb upstream 5.0kb upstream 9099 true Chr12: 670878-679976 Glycine max
Glyma.12G009300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 670878-675877 Glycine max
Glyma.12G009300 5.0kb downstream 5.0kb downstream 9099 true Chr12: 675878-684976 Glycine max
Glyma.12G009300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 679977-684976 Glycine max
Glyma.12G009300 10.0kb upstream 10.0kb upstream 14099 true Chr12: 665878-679976 Glycine max
Glyma.12G009300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 665878-675877 Glycine max
Glyma.12G009300 10.0kb downstream 10.0kb downstream 14099 true Chr12: 675878-689976 Glycine max
Glyma.12G009300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 679977-689976 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
122254256 5265 Fabidae View MSA
124073694 5270 Rosid View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.144773 0.0 0.565098 Low  
cufflinks 0.450371 0.0 1.67051    
cufflinks 0.255508 0.0 0.97138    
cufflinks 0.416759 0.0 1.55108    
cufflinks 0.0407842 0.0 0.16759 Low Low
cufflinks 0.0891177 0.0 0.353933 Low  
cufflinks 0.137971 0.0 0.539642 Low  
cufflinks 3.59598 0.0 10.82   High
cufflinks 0.106375 0.0 0.419652 Low  
cufflinks 0.038     Low  
cufflinks 0.019     Low  
cufflinks 0.164        
cufflinks 0.004     Low Low
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.154        
cufflinks 0.168        
cufflinks 0.123        
cufflinks 0.195        
cufflinks 0.137        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.186        
cufflinks 0.209        
cufflinks 0.028     Low  
cufflinks 0.215        
cufflinks 0.008     Low Low

0 Strain