Gene : Glyma.12G009600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23105:SF5 - 39S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL Genomic Order:  96
Name:  ? Glyma.12G009600 Secondary Identifier:  ? PAC:30548940
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G009600 0.5kb upstream 0.5kb upstream 4758 true Chr12: 694413-699170 Glycine max
Glyma.12G009600 0.5kb upstream 0.5kb upstream 500 false Chr12: 698671-699170 Glycine max
Glyma.12G009600 0.5kb downstream 0.5kb downstream 4758 true Chr12: 693913-698670 Glycine max
Glyma.12G009600 0.5kb downstream 0.5kb downstream 500 false Chr12: 693913-694412 Glycine max
Glyma.12G009600 1.0kb upstream 1.0kb upstream 5258 true Chr12: 694413-699670 Glycine max
Glyma.12G009600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 698671-699670 Glycine max
Glyma.12G009600 1.0kb downstream 1.0kb downstream 5258 true Chr12: 693413-698670 Glycine max
Glyma.12G009600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 693413-694412 Glycine max
Glyma.12G009600 2.0kb upstream 2.0kb upstream 6258 true Chr12: 694413-700670 Glycine max
Glyma.12G009600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 698671-700670 Glycine max
Glyma.12G009600 2.0kb downstream 2.0kb downstream 6258 true Chr12: 692413-698670 Glycine max
Glyma.12G009600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 692413-694412 Glycine max
Glyma.12G009600 5.0kb upstream 5.0kb upstream 9258 true Chr12: 694413-703670 Glycine max
Glyma.12G009600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 698671-703670 Glycine max
Glyma.12G009600 5.0kb downstream 5.0kb downstream 9258 true Chr12: 689413-698670 Glycine max
Glyma.12G009600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 689413-694412 Glycine max
Glyma.12G009600 10.0kb upstream 10.0kb upstream 14258 true Chr12: 694413-708670 Glycine max
Glyma.12G009600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 698671-708670 Glycine max
Glyma.12G009600 10.0kb downstream 10.0kb downstream 14258 true Chr12: 684413-698670 Glycine max
Glyma.12G009600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 684413-694412 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299154 5265 Fabidae View MSA
124061690 5270 Rosid View MSA
123738207 5271 Pentapetalae View MSA
122788620 5272 Eudicot View MSA
122046833 5273 Angiosperm View MSA
121346612 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 101.842 0.0 317.156 High High
cufflinks 24.8742 0.0 66.6192 High  
cufflinks 11.5565 0.0 31.1946    
cufflinks 10.7633 0.0 29.1648    
cufflinks 3.27516 0.0 10.1011    
cufflinks 2.49198 0.0 7.99094    
cufflinks 9.71288 0.0 26.5102    
cufflinks 4.1587 0.0 12.3865    
cufflinks 1.37497 0.0 4.74393   Low
cufflinks 5.168        
cufflinks 0.514        
cufflinks 4.528        
cufflinks 0.183       Low
cufflinks 0.19       Low
cufflinks 1.175        
cufflinks 31.178     High High
cufflinks 0.391        
cufflinks 5.3        
cufflinks 10.389     High  
cufflinks 40.046     High High
cufflinks 0.314       Low
cufflinks 31.6     High High
cufflinks 28.534     High High
cufflinks 0.345       Low
cufflinks 39.213     High High
cufflinks 0.865        

0 Strain