Gene : Glyma.12G011400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13878:SF53 - CYTOKININ DEHYDROGENASE 6 Genomic Order:  114
Name:  ? Glyma.12G011400 Secondary Identifier:  ? PAC:30546124
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G011400 0.5kb upstream 0.5kb upstream 3436 true Chr12: 831481-834916 Glycine max
Glyma.12G011400 0.5kb upstream 0.5kb upstream 500 false Chr12: 834417-834916 Glycine max
Glyma.12G011400 0.5kb downstream 0.5kb downstream 3436 true Chr12: 830981-834416 Glycine max
Glyma.12G011400 0.5kb downstream 0.5kb downstream 500 false Chr12: 830981-831480 Glycine max
Glyma.12G011400 1.0kb upstream 1.0kb upstream 3936 true Chr12: 831481-835416 Glycine max
Glyma.12G011400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 834417-835416 Glycine max
Glyma.12G011400 1.0kb downstream 1.0kb downstream 3936 true Chr12: 830481-834416 Glycine max
Glyma.12G011400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 830481-831480 Glycine max
Glyma.12G011400 2.0kb upstream 2.0kb upstream 4936 true Chr12: 831481-836416 Glycine max
Glyma.12G011400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 834417-836416 Glycine max
Glyma.12G011400 2.0kb downstream 2.0kb downstream 4936 true Chr12: 829481-834416 Glycine max
Glyma.12G011400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 829481-831480 Glycine max
Glyma.12G011400 5.0kb upstream 5.0kb upstream 7936 true Chr12: 831481-839416 Glycine max
Glyma.12G011400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 834417-839416 Glycine max
Glyma.12G011400 5.0kb downstream 5.0kb downstream 7936 true Chr12: 826481-834416 Glycine max
Glyma.12G011400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 826481-831480 Glycine max
Glyma.12G011400 10.0kb upstream 10.0kb upstream 12936 true Chr12: 831481-844416 Glycine max
Glyma.12G011400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 834417-844416 Glycine max
Glyma.12G011400 10.0kb downstream 10.0kb downstream 12936 true Chr12: 821481-834416 Glycine max
Glyma.12G011400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 821481-831480 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304864 5265 Fabidae View MSA
124067544 5270 Rosid View MSA
123739719 5271 Pentapetalae View MSA
122789559 5272 Eudicot View MSA
122043660 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.12787 0.0 6.70321   High
cufflinks 0.189278 0.0 0.856736 Low  
cufflinks 0.916111 0.0 5.66769    
cufflinks 0.223772 0.0 1.00693    
cufflinks 0.239411 0.0 2.63416    
cufflinks 0.0163917 0.0 0.0901967 Low Low
cufflinks 0.00777045 0.0 0.0653929 Low Low
cufflinks 0.368899 0.0 3.57144    
cufflinks 0.459636 0.0 5.17423    
cufflinks 0.031     Low Low
cufflinks 0.327        
cufflinks 0.764        
cufflinks 0.054     Low  
cufflinks 0.007     Low Low
cufflinks 0.237        
cufflinks 0.35        
cufflinks 0.25        
cufflinks 0.047     Low Low
cufflinks 0.169        
cufflinks 0.145        
cufflinks 1.323       High
cufflinks 0.143        
cufflinks 0.404        
cufflinks 1.135       High
cufflinks 0.185        
cufflinks 1.474       High

0 Strain