Gene : Glyma.12G002100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11695:SF507 - QUINONE-OXIDOREDUCTASE HOMOLOG, CHLOROPLASTIC-RELATED Genomic Order:  21
Name:  ? Glyma.12G002100 Secondary Identifier:  ? PAC:30545972
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G002100 0.5kb upstream 0.5kb upstream 3042 true Chr12: 157808-160849 Glycine max
Glyma.12G002100 0.5kb upstream 0.5kb upstream 500 false Chr12: 160350-160849 Glycine max
Glyma.12G002100 0.5kb downstream 0.5kb downstream 3042 true Chr12: 157308-160349 Glycine max
Glyma.12G002100 0.5kb downstream 0.5kb downstream 500 false Chr12: 157308-157807 Glycine max
Glyma.12G002100 1.0kb upstream 1.0kb upstream 3542 true Chr12: 157808-161349 Glycine max
Glyma.12G002100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 160350-161349 Glycine max
Glyma.12G002100 1.0kb downstream 1.0kb downstream 3542 true Chr12: 156808-160349 Glycine max
Glyma.12G002100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 156808-157807 Glycine max
Glyma.12G002100 2.0kb upstream 2.0kb upstream 4542 true Chr12: 157808-162349 Glycine max
Glyma.12G002100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 160350-162349 Glycine max
Glyma.12G002100 2.0kb downstream 2.0kb downstream 4542 true Chr12: 155808-160349 Glycine max
Glyma.12G002100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 155808-157807 Glycine max
Glyma.12G002100 5.0kb upstream 5.0kb upstream 7542 true Chr12: 157808-165349 Glycine max
Glyma.12G002100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 160350-165349 Glycine max
Glyma.12G002100 5.0kb downstream 5.0kb downstream 7542 true Chr12: 152808-160349 Glycine max
Glyma.12G002100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 152808-157807 Glycine max
Glyma.12G002100 10.0kb upstream 10.0kb upstream 12542 true Chr12: 157808-170349 Glycine max
Glyma.12G002100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 160350-170349 Glycine max
Glyma.12G002100 10.0kb downstream 10.0kb downstream 12542 true Chr12: 147808-160349 Glycine max
Glyma.12G002100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 147808-157807 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297516 5265 Fabidae View MSA
124066086 5270 Rosid View MSA
123737639 5271 Pentapetalae View MSA
122791536 5272 Eudicot View MSA
122045345 5273 Angiosperm View MSA
121351362 5274 Embryophyte View MSA
123428381 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 111.572 0.0 342.652 High High
cufflinks 79.3845 0.0 231.49 High  
cufflinks 125.372 0.0 394.613 High High
cufflinks 60.5454 0.0 170.766 High  
cufflinks 51.8283 0.0 143.869 High  
cufflinks 107.93 0.0 330.567 High  
cufflinks 47.2685 0.0 129.917 High Low
cufflinks 88.6232 0.0 262.853 High  
cufflinks 49.599 0.0 137.122 High Low
cufflinks 31.911     High  
cufflinks 7.148     High Low
cufflinks 38.772     High  
cufflinks 23.19     High  
cufflinks 14.544     High  
cufflinks 4.617       Low
cufflinks 35.958     High  
cufflinks 17.867     High  
cufflinks 22.738     High  
cufflinks 32.407     High  
cufflinks 37.151     High  
cufflinks 9.605     High Low
cufflinks 39.55     High  
cufflinks 37.945     High  
cufflinks 12.996     High  
cufflinks 35.644     High  
cufflinks 17.637     High  

0 Strain